Micromonospora sp. B006: MicB006_6118
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Entry
MicB006_6118 CDS
T05583
Name
(GenBank) pectate lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
micb
Micromonospora sp. B006
Pathway
micb00040
Pentose and glucuronate interconversions
micb01100
Metabolic pathways
micb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
MicB006_6118
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MicB006_6118
Enzymes [BR:
micb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
MicB006_6118
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
AXO38376
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Position
6824972..6826537
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AA seq
521 aa
AA seq
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MRRPVALRLHAALATAVVGIAVAVALPSPQASAAAGSATGYATQNGGATGGAGGQTVRAT
TGTAIHAALCGRASSSTPIIIEVTGTINHGNTSKVSGSSCNTADGVIELKQISNVTIIGV
GSGAVFDQLGIHIRDSRNIIIRNVTVRNVKKSGSPTSNGGDAIGMESSVRNVWVDHVTLE
ASGGESEGYDGLFDMKDDTQYVTLSYSILRNSGRGGLIGSSESDRGNGYITFEHNLYENI
DSRTPLLRGGIAHMFNNHYTGLHESGINSRAGARAKVDNNYFRNSKDVLGTFYTSERGTW
QVSGNIFDNVTWSSPGSDNYPAGPNVTSTTTVSVPYSYRLDAASCVPDVVRQTAGPNTGL
RVSDGNCTPQSPTPTTPAPTTPAPTTPPPGTTTPPPSGGTNLSLLSGAGADGSSKADGTS
YGNVRDGSLSTYWSPSGSTGTVSIKWGSATTVSRVVIREPSGTSGSIGSWQLVNNDTGAV
LASGSGAGQITFGATSLKKINFKINSSSGTPRVGEFETYAS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaccagtcgcgctgcgactccacgcggcactggccacggcggtcgtggggatc
gccgtcgccgtggcgctcccgtccccgcaggcgtcggcggcggccggcagcgccaccggc
tacgccacccagaacggcggcgccaccggcggcgcgggcgggcagacggtacgcgccacc
accggcaccgccatccacgccgcgctgtgcgggcgggccagcagcagcaccccgatcatc
atcgaggtgaccgggaccatcaaccacggcaacaccagcaaggtctccggatcgagctgc
aacaccgccgacggcgtgatcgagctgaagcagatcagcaacgtcaccatcatcggcgtg
ggcagcggcgccgtcttcgaccagctcggcatccacatccgcgactcgcgcaacatcatc
atccgcaacgtgacggtgcgcaacgtcaagaagtccggctcgcccacctccaacggcggt
gacgcgatcggcatggagagcagcgtccgcaacgtctgggtcgaccacgtgacgctggag
gcgtccggcggggagtcggagggctacgacggcctgttcgacatgaaggacgacactcag
tacgtgacgctgtcgtacagcatcctgcgcaactccggccggggcggcctcatcgggtcc
agcgagagcgaccgcggcaacggctacatcacgttcgagcacaacctgtacgagaacatc
gactcccgtacgccgctgttgcgtggcggcatcgcccacatgttcaacaaccactacacc
gggctgcacgagtcgggcatcaactcccgggccggcgcgcgggccaaggtggacaacaac
tacttccgcaactccaaggacgtgctcggcacgttctacaccagcgagcgcggcacctgg
caggtcagcggcaacatcttcgacaacgtgacctggtcctcgcccgggagcgacaactac
ccggcggggccgaacgtgacgtccacgaccaccgtcagcgtgccgtactcgtaccgtctg
gacgcggcgagctgcgtgccggacgtcgtgcggcagacggcgggcccgaacaccggcctg
cgcgtctccgacggcaactgcacgccgcagtccccgaccccgaccactcccgcacccacc
acgcccgcacccaccacgccgccgcccgggacgaccaccccgcccccgtccggcgggacc
aacctgagcctcctctccggggccggcgccgacgggtccagcaaggccgacggcaccagc
tacggcaacgtgcgcgacggcagcctgagcacctactggtcgccgtccggatccaccggc
accgtctcgatcaagtgggggtcggccaccaccgtgtcccgcgtggtcatccgcgagccg
tccggcacctcgggctcgatcgggtcctggcagctcgtcaacaacgacaccggcgcggtg
ctggcctccggcagcggggctggccagatcaccttcggcgcgacttcgctgaagaagatc
aacttcaagatcaacagctccagcggtacgccgagagtcggcgagttcgagacgtacgcc
agttag
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