Micromonospora sp. B006: MicB006_6204
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Entry
MicB006_6204 CDS
T05583
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
micb
Micromonospora sp. B006
Pathway
micb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
micb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MicB006_6204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micb03400
]
MicB006_6204
Enzymes [BR:
micb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MicB006_6204
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MicB006_6204
DNA repair and recombination proteins [BR:
micb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MicB006_6204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_ribbon_RRN7
NFACT_N
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AXO38459
LinkDB
All DBs
Position
6926760..6927620
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AA seq
286 aa
AA seq
DB search
MPELPEVEALAGYLRERAVGRRVERFEVAAISALKTYDPPPSTVAGRTVTGAGRYGKFLD
VRFDEGLHLVVHLARAGWLHYREAFPSATPLRPGKGPIAVRVRLDDGSGFDLTEAGTQKK
LAAYLVTDPALVPGVAKLGPDALEADLPTFAERLRSRRGQVKGVLTDQSVLAGVGNAYSD
EILHAARLSPFAITDRLTDDQLAGLHAATRTVLGDAVRRSMGQRAAELKGEKRSGLKVHA
RKGLPCPVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRLSRLVR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaacttccggaggtggaagcgctcgccggttacctgcgcgagcgtgcggtgggc
cgccgcgtcgagcggttcgaggtcgccgcgatcagcgcgctgaagacgtacgatccgccg
ccgagcactgtcgccggccgcacggtcaccggcgccggccggtacggcaagttcctcgat
gtccggttcgacgagggactgcacctggtggtccacctggcccgggcgggctggctgcac
taccgggaggcgttcccctcggcgacgccgctgcggcccggcaagggcccgatcgcggtg
cgggtacgcctcgacgacgggtccggcttcgacctgaccgaggcgggcacccagaagaag
ctggccgcctatctggtcaccgacccggcgctggtgccgggcgtggcgaagctggggccg
gacgcgctggaggcggacctgccgaccttcgccgagcggctgcgcagccgccggggccag
gtcaagggcgtgctgaccgaccagtcggtgctcgccggggtgggtaacgcgtactccgac
gagatcctgcacgcggcgcggctgtcgccgttcgcgatcaccgaccggctcaccgacgac
cagctcgccggtctgcacgcggccacccggaccgtcctcggcgacgcggtacgccggtcg
atggggcagcgggcggcggagctgaagggcgagaagcgctccgggctcaaggtgcacgcc
cgtaagggccttccgtgtccggtgtgtggcgacacggtgcgcgaggtctcgttcgccgat
tcgagcctgcagtactgccccacctgccagaccggcgggaagccgctggctgaccgaagg
ttgtcccgtctcgtacggtga
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