Microbulbifer aggregans: AUP74_00123
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Entry
AUP74_00123 CDS
T04560
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
micc
Microbulbifer aggregans
Brite
KEGG Orthology (KO) [BR:
micc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
micc03016
]
AUP74_00123 (rnd)
Enzymes [BR:
micc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AUP74_00123 (rnd)
Transfer RNA biogenesis [BR:
micc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AUP74_00123 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
AOS95599
UniProt:
A0A1C9W387
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All DBs
Position
complement(136878..138011)
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AA seq
377 aa
AA seq
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MLNVDTTPRWVDSSEELAELCRKWRGQKAVALDTEFMRSRTFYPLPALVQVGDGEHCYLI
DNLAIENLEPLRDLLVDTSVTKIMHSCSEDLETLDRLLGVIPEPIFDTQIAAAMTGLGAG
LGYAGTVKALINVELPKSETRSDWLQRPLSEAQKTYAALDVAWLPHIYAVLLKRLKESGR
LDWLQEDCAELVAAARNPQPPELYYQKVKGAWRLRGKQLAALQDLCAWREREARLRDMPR
NHLLKEAVCLNLAQQLPDHPAAMAQPGLEGRALREYGDTLLKIITRACERADVPPSLPQP
LNRRQGECLKMLRKRVSEIAEREDLPAEILVRKKELEALVQARCPSLEGRLRGWRGDLIG
GALMESLETAREVPESK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatgtggataccacgccgcgttgggtggacagtagtgaagagcttgccgagctc
tgccgcaaatggcgcgggcagaaagccgtggcgctcgataccgagttcatgcgcagccgc
accttctatccgctgccggcgctggttcaggtgggtgacggcgaacactgctatctgatc
gataatctggcgattgagaacctggaaccgttgcgcgatttactggtggacaccagtgtg
accaagatcatgcacagctgtagcgaggatctcgagaccctggatcggctgcttggtgtg
attcccgaacccattttcgatacccagattgccgccgccatgaccggactcggtgccggc
ctcggctatgccggtacggtcaaggcgctgatcaatgtggagttgccgaagagcgagacg
cgctcggactggttacagcgaccactgagcgaagcccagaagacctatgccgcactcgac
gttgcctggctgccccacatctatgccgtgctcctgaagcgcctcaaagagagtggtcgg
ctggattggctgcaggaggattgtgccgagttggtggcggctgcgcgcaatccgcagccg
ccggagctgtattaccagaaagtgaagggtgcctggcgcctgcgtggcaagcagctggcc
gccctgcaggacctgtgtgcctggcgggagcgggaggcgcgactgcgcgatatgccgcgc
aatcacctgctgaaagaagctgtctgtctgaatctggcgcagcagctgccggatcatcct
gccgctatggcacagcctgggctcgaagggcgtgccctgcgcgaatatggtgacacgctg
ctcaagatcattacccgcgcctgtgagcgcgccgatgtgccgccgtcgctgccgcagccg
ctcaatcgtcgacagggcgaatgtctgaaaatgctgcgcaagcgggtcagcgagattgcc
gaacgggaagacctgcctgcggaaattctcgtgcgcaaaaaagaattggaggcattggtc
caggccagatgcccatcccttgagggccgtttgcgtggatggcgcggcgatttgattggc
ggcgccctgatggaaagcctggaaaccgcccgggaagtaccggagagtaagtag
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