Microbulbifer aggregans: AUP74_00865
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Entry
AUP74_00865 CDS
T04560
Symbol
uvrD_1
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
micc
Microbulbifer aggregans
Pathway
micc03420
Nucleotide excision repair
micc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
micc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AUP74_00865 (uvrD_1)
03430 Mismatch repair
AUP74_00865 (uvrD_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micc03400
]
AUP74_00865 (uvrD_1)
Enzymes [BR:
micc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUP74_00865 (uvrD_1)
DNA repair and recombination proteins [BR:
micc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AUP74_00865 (uvrD_1)
MMR (mismatch excision repair)
Other MMR factors
AUP74_00865 (uvrD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AOS96332
UniProt:
A0A1C9W5A9
LinkDB
All DBs
Position
complement(988079..990274)
Genome browser
AA seq
731 aa
AA seq
DB search
MDVSQILDPLNDAQREAVAAPPGNQLVLAGAGSGKTRVLVHRIAWLMQVEGASPYSILAV
TFTNKAAREMRARIEELLGVNTFGMWVGTFHGIAHRLLKAHYKEANLPQNFQILDSDDQL
RLIKRVQNDLGLDEKKWPPRETQWWIGAQKDEGLRPQYIEAGGDPWLQTMVRTYFAYEEA
CQRGGLVDFGELLLRAHELLLNNDSVLAHYRNRFPYILVDEFQDTNTIQYAWLRLLAGDQ
CRITAVGDDDQSIYGWRGAKIENIQHFESDMHEVQTVRLEQNYRSTSTILKAANAVIEHN
AGRLGKELWTRGEEGEPISLYAAYNEQDEARFIVERIQDWVRDGHRRDSVAILYRSNAQS
RVLEEALLREQVPYRIYGGQRFFERMEIKNALSYMRLITNRDDDTAFERVVNTPTRGIGA
RTVDAVRNFAREHGCSMWQAATRMLQQRVLAARAGNALQGFLDLVNQLAANAEDKLLGAI
AEDVIETSGLMDFHGKEKGEKGQTRVENLQELVSACRDFDGIEIPEGEEEPPLLNQFLDS
AALDAGEGQADEFEDAVQLMTLHSAKGLEFPLVFLAGVEENLFPHKMSAQEPGRMEEERR
LCYVGITRAMMKLYITYAENRRLFGSETYNSPSRFIGEIPPELVHEVRLKTEISRPLFNA
DYGKAGRLSDPAPDFDDLPPLALGGRVDHPKFGEGTVVQFEGSGPRARVQVNFDDAGSKW
LVVAMAKLQPL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatctcagattctagaccccctcaatgacgcgcagcgcgaggccgttgctgca
cctcccggtaaccagctggtactggccggcgccggctccggcaagacccgtgtgctggtg
caccgcatcgcctggctgatgcaggtggagggcgcctcgccctactccatccttgccgtc
acctttaccaacaaggccgcccgcgagatgcgcgcgcggatcgaggaactgctgggggta
aacacctttggcatgtgggtgggcaccttccacggtattgcgcaccgcctgctcaaggcc
cactacaaagaggccaacctgccgcagaacttccagatcctcgatagcgacgatcagctg
cgcctgatcaagcgggtgcagaatgacctggggctggacgagaagaagtggccgccgcgg
gagacccagtggtggatcggcgcccagaaagatgagggcctgcgcccccagtatatcgag
gctggcggcgatccctggttgcagaccatggtgaggacttactttgcctacgaggaggcc
tgtcagcgcggtggtttggtggatttcggtgagctgctgttgcgcgcccatgagctgcta
ctgaacaacgattccgtactggcgcactatcgcaaccgcttcccctacatcctggtggac
gagttccaggacaccaacaccatccagtacgcctggctgcggctactggccggtgaccag
tgccgtatcaccgcggtcggcgacgacgaccagtccatttacggctggcgcggtgccaag
atcgagaatatccagcacttcgagagcgatatgcacgaggtgcagaccgtgcgcctggag
cagaattaccgctccaccagtaccatcctcaaggccgccaatgcggtgatagagcacaat
gccggccgcctgggcaaggagctgtggacccgcggtgaagaaggcgagcctatctccctc
tacgccgcctacaacgaacaggacgaagcgcgctttatcgtcgagcggatccaggactgg
gtccgcgacggccaccgccgcgacagcgtggcgatcctttaccgctccaacgcccagtcg
cgggtgctggaagaggcgctgctgcgggagcaggtgccctatcgcatctacggcggccag
cgctttttcgaacgcatggagatcaagaacgcgctgtcctacatgcgcctgatcaccaac
cgggatgacgacaccgccttcgagcgggtggtgaacacgcctacccgcggcatcggcgcg
cgcaccgtggatgcggtgcgcaatttcgctcgcgagcacggctgctccatgtggcaggcg
gccacgcgcatgctgcagcagcgggtgttggctgcgcgggccggcaacgccctgcagggc
ttcctggacctggtcaaccagctggcggccaatgccgaggacaagctgctgggcgccatt
gccgaggacgtgatcgaaaccagtggcctgatggacttccacggcaaggaaaagggcgag
aaaggccagacccgggtggaaaacctgcaggaactggtgagtgcctgtcgcgatttcgac
ggaatcgagattccggaaggcgaggaagagccaccgctgctgaaccagttcctcgacagc
gccgccctggatgccggtgaggggcaggcggacgaattcgaagacgcggtgcagctgatg
accctgcactccgccaaggggctggaattcccgctggtgttcctggccggggtggaggaa
aacctgttcccgcacaagatgtcggcgcaggaacctggccgcatggaggaagagcgccgc
ctctgttacgtgggcatcacccgcgccatgatgaagctgtatatcacctacgcggagaac
cgccgcctgttcggcagcgagacttacaacagcccgtcgcgtttcattggtgagattccg
ccggagctggtacacgaggtgcgtctcaagaccgagatttcgcggccactgttcaacgcg
gactacggcaaggcggggcgactctccgacccggcgccggatttcgacgatctgccgcca
ctggcgctgggcggtcgcgtcgatcacccgaagtttggtgagggcacggtggtccagttc
gagggcagcggcccgcgcgcgcgggtgcaggtcaacttcgacgatgccggcagcaagtgg
ctggtggtggcgatggccaagttacagccactgtaa
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