Microbulbifer aggregans: AUP74_01013
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Entry
AUP74_01013 CDS
T04560
Symbol
lgrD
Name
(GenBank) Linear gramicidin synthase subunit D
Organism
micc
Microbulbifer aggregans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Condensation
PP-binding
AMP-binding_C
Hexapep
Motif
Other DBs
NCBI-ProteinID:
AOS96478
UniProt:
A0A1C9W5Q2
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All DBs
Position
1148375..1154386
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AA seq
2003 aa
AA seq
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MNIVEHLSANFSRFTLGETEQSIAERFEKIALLYGGRLAITDANSSITYGALNQLANRMA
RNILSVAPAEEPVRIAVFMEKGIQNIAAILAVLKCGHAYVPIDPEFPEERNRHIYRESGA
ALLVTNTNSRAAAAKLAGDTARILDLDGIPESTNSDNLDVDISPDALAYIIYTSGSTGRP
KGVVQNQRNVLHGCMRRTNLQKVIPQDRMTLFYSCSVIASVYCIFGALLNGASLFPYDFR
TDGVEKLANWLRSRRITIYHSVASVFREFARSYQGADDVFDVRLVIFGGERVLTSDVELA
RKVFSRKIAFYTGLGSTETGTMRYFPIDEDTEIDEEVVPIGYPVEGIDVLLLDEEGNEVA
AGEVGEIAVRSRYVALGYWKNSEASEKAFYSDPKDPDVRIYRTGDLGQMEQDGLLRHRGR
KDFQVKIRGFRVEVSEVEANLIDHPAISEAVVVARDLRGETQLVAYIVPAEGELVTVQGL
RNYLADRLTYYMIPTVVVCLDQLPKTPNNKVDRNALPEPDEKNILATETRVPPQGATESQ
LVEFAREVLDREDIGTNQNFFDLGGHSLRAMQLLARIREHFAADLSVRAIFEARDFKDLA
TAIDAAPPLSEDSQPEFIHAPETARLPLSSAQTRMWLADQLYGGGAAYNISNTVYLEGEL
NLPALEEAIGQIVSRHSILRTRFPSDEAGPRQEILPADAFELNVIDLRAMAKAERAKRAM
QICRRLLEARQDLADGPLFCSTLVRVGERAAVLALVFNHIIYDNIWSSAIFFRELAHLYG
ALSQGHAASLPPLEFQFVDYAYWEQSQAQSPSQAKQLAFWRDQLSGAPETLDLPADHPPQ
GKPDFSGGIVRFKLPTAPWAAARTVAKQESVTGFMVLLAVWQLLLHRYSGQDDILVGTPT
GRRPLTQTEDMIGLFINTLVLRTDFSSAPGFRELLAQVRATTIDAFSNDQVPFERVVADL
NPDRRGGTAPLFQHLFIHRQMEGDQWQLPGLQVKPLEIHSGGSKFDLTLSVLEKADEVAC
TIEYRRARFERQTIERMSQHFTQLLEGAVTAPDCPVGELPMIGAAERCKLREQVQRTART
LPVQETTAQLFERVATLRSEEIAVIAGTEQLTYSALNRAANALARDLIDRGLKPGQLVAV
CIDREISMVSALLAVWKAGGAYVPLDPHFPAERLSYMLEDSGAGFLITAAALRDRFSDFS
GEVLQPPEPDEVLARDRCRNLQPLAGGNDLAYVIYTSGSTGRPKGVEITHRSLVNFLCAM
QKEPSFSADDRLLAVTTLCFDIAMLEIFLPLISGGSVVIQDRRGCMDPQKIREAIEKHNI
SVMQATPATWRMLLDFGWQGEPSVRVFCGGEAMGEDLAASLLERGLEVWNLYGPTETTIW
SAAGRIRAPAEARFVGAPIANTRLYVLNSAGASQPAGVPGELCIGGAGLARGYRNREELT
REKFFSSELDPHGRLYRTGDLVVQRLDGRLEFLGRIDHQVKIRGFRVELGEIESALLGDD
IRRAVVIAHNDDFGSQYLAAYLIPVDGAKIDITALRTRLRQTLPEYMVPAHFVTLDAFPM
TANGKVDRKAFPPPSDNAAAGQDPQPQTQTPPDSEPAGPAPIKVKVQQPRKAPAPEHSKS
TVTPSKEQPKKTVLREPEAEVEPPQQTAVKQTREIVGVDAVPNNPPGKATPSPVEDVVRA
VFRDVLKVPIESDEASFFDLGGHSLAAIHAIARLNQHFGLSLPPTLLFDFASIRQLSSAI
TAFREGQSEQEVMEQASLDEATSRQVDAILEAVKEKKDALDMPDFPHGMKMRESPFARKW
LAPLFAIRSGFLRILLQKLILKLEGGSTFSVTMRKLYRQHYDIHVADFSSVPFEPTRLKR
TTRIGKYCTIYRTVNFQNADHPRNTLSTHGLFYSRGLGFSTGYELDRVTIEVGNDVWIGD
GAKILYPTRKIGDGAVIAAGAVVVEDVPPYAIVAGYPAQVVRYRFSRETIAKLESLKWWE
MSDRNLFHARGEFLRPLEGDRVH
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcgagcatctctccgccaatttttcccgtttcacgttgggggaaacggag
cagtcgatcgcggaacgctttgaaaagattgccctgctatatggcgggcgtttggcaatt
actgatgccaattcatccattacttatggtgcgctgaaccagctcgccaatcgaatggcg
agaaatatcctttccgtagcgccggccgaagagccggtacgcatcgcggttttcatggaa
aagggcatccagaatattgccgccattctcgccgtgctgaagtgcggccatgcttacgtc
cccatcgaccccgagtttccggaagagcggaaccgtcatatctaccgggagtccggggct
gccctgctggtaaccaataccaatagccgcgcagcggcagccaaactggccggggacact
gcccgcatcctggatctggatgggatcccggagagcaccaacagcgataacctcgatgtc
gatatctcgccggatgcccttgcgtacatcatctatacctccggctccactggcagaccc
aagggggtggtgcagaaccagcgcaatgtgctccatggctgcatgcgtcgcactaatctg
cagaaggtgattccccaggaccggatgacgcttttctattcctgcagtgtcatcgcctcg
gtgtactgcatttttggtgcgctgctgaacggtgcatctctatttccctatgatttccgc
accgatggggtggagaagctcgcgaattggctccgctcgcgccggattaccatctaccac
tcggtggcctcggtctttcgtgagtttgcacgctcataccagggcgcggatgatgtgttt
gatgtccgcctggtgatctttggtggcgagcgcgtgctgaccagcgatgtggaattagcg
cgcaaggtcttctcccgaaaaatcgccttttacacgggtctcggctctaccgagaccggc
accatgcgctatttcccgattgacgaagatacggagatcgatgaggaagtggtgccgatc
ggatacccggtcgaaggtatcgacgtgctgctcctggatgaagagggcaatgaagtagcg
gcgggcgaggtgggcgagattgctgtccgcagtcgctatgtcgccctcggctactggaaa
aattccgaggcgagcgagaaggcgttctactccgatcccaaagatcccgacgtccgtatc
taccgcaccggcgacctgggccagatggaacaagacggcttgctgcgccaccgcggccgc
aaggacttccaagtaaagattcgcggcttccgggttgaggtgagtgaggtagaggccaac
ctgatcgatcatccggcgatctccgaggccgtggtggtggcgcgtgacctccgtggcgag
acccagctggtggcgtacattgtgcccgcggaaggagagctggtaacggtacaggggctt
cgcaattatcttgccgatcggctcacctactacatgatccccacagtggtggtgtgtctc
gatcagttgcccaaaacgccgaataacaaggtcgaccgcaacgcgctacccgagccggac
gagaaaaatatccttgcaaccgagacacgggtgcccccccagggggcgacggaatcgcaa
ctggtggaatttgctcgtgaagtgctggaccgggaagatatcggcaccaaccagaacttc
tttgacctcggcggccactctctgcgtgccatgcagttacttgcccgtatccgcgagcat
tttgctgcggacctgtcggtgcgggcaatttttgaagcgcgggacttcaaggacctggca
acagcgattgatgcggcaccaccactgagtgaggattctcagccggaattcattcatgcg
ccggaaacggctcgcctgccattgtcatcggcgcaaaccagaatgtggctggcagaccag
ctttacggcggtggagcggcttacaacatctccaataccgtttacctggagggcgagctg
aacctgccggcactggaagaggccattggccaaatcgtgtcgcggcacagtattctgcgc
acccggttcccaagcgatgaggcgggaccccgccaggaaattttgcccgcagacgcattc
gagctgaacgtgatcgatctgcgcgcgatggcaaaagcggagcgcgcaaaacgtgcgatg
cagatctgtcgccgtctcctggaggcgcgtcaggatctggctgatgggccactattctgc
agtactctggtacgagtgggcgagcgggcggccgtattggcgctcgttttcaaccatatc
atttacgacaatatctggtcttcggcgatcttcttcagagagttggcccacctctacggt
gcgctgagccagggccatgcggcctcgctgccgccgctggaattccagtttgtcgattat
gcctattgggagcagagccaggcgcaaagcccgagtcaggcaaagcagttggcattctgg
cgcgatcagctgtcgggcgctccggagaccctggacctgccggcggaccatcccccgcag
ggcaaacccgacttcagcggcggtatcgtacgcttcaagttgccgactgctccttgggct
gcggccaggacagtggcaaagcaggagtcagtcaccggcttcatggtattgcttgccgtc
tggcagttgctactgcatcgctactccggccaggacgacatccttgtcggcacacctact
ggtcgccgtccgctgacccagaccgaggacatgatcggcctgttcatcaacaccctggta
ctgcgcaccgacttttcctcagcgccaggcttccgtgaattactggcgcaggtgcgtgcg
accaccatcgacgccttctccaatgaccaggttcccttcgaacgcgtagtggcagatttg
aacccggatcgtcgcgggggaacagcgccgttgttccagcacctgttcatacaccgccag
atggagggggatcagtggcagctgccgggactgcaggtcaagccactggaaattcacagt
ggcggatccaagttcgatctgacactttctgtgcttgaaaaagcagatgaagtcgcttgc
acaatcgaatatcgccgcgcgcggttcgaacggcagactattgagcggatgagccagcat
ttcacccagctcctcgagggtgccgtcactgcaccggactgccccgtcggtgagctgcca
atgatcggcgcggcggagcgctgcaagctgcgggaacaggtgcaacgcacggcgcgcaca
ctgccggtgcaagagacaaccgcgcaactgttcgagcgtgtagccacattgcgctccgaa
gagattgccgtgattgccggcaccgagcagttaacctatagcgcgctgaaccgagcagcc
aatgcactggctcgcgatcttatcgatcgtggtctcaagcctggacagctggtggccgta
tgcattgaccgggaaatctccatggtcagcgcattgctggcggtctggaaggccgggggc
gcatatgtgccgctggatccccacttcccggcagagcggctgtcctacatgctcgaagat
tccggcgcgggcttcctgattacagcagcggcactgcgggaccgtttttcagacttttcc
ggagaggtgctacagccgcccgagccagacgaagtgctggcacgggatcgctgtcggaat
ctgcagcccctggccggcggcaatgacctcgcctatgtcatttatacctccggctctacc
ggccgaccgaaaggggtggagattacccaccgcagcctggtgaacttcctctgcgccatg
cagaaagagcctagtttcagcgcggatgaccggctgctggcagtaaccacactctgcttc
gatatcgccatgctggagattttcctgccgttgatcagtggtggcagcgtcgtgatccag
gatcgccgtggatgcatggatccgcagaaaatccgcgaggcgatcgaaaaacacaacatc
agcgtcatgcaggcgactccagcgacctggcgtatgttgcttgattttggctggcagggt
gaaccgagtgtccgcgtattctgtggtggcgaagccatgggcgaggatcttgcggcgagc
ctgttggaacgcgggctggaagtctggaatctctacggccccaccgagaccacgatctgg
tcggctgcgggcagaattcgcgcgcctgctgaggcccgtttcgtcggggccccgattgcg
aacacgcgactgtatgtcctcaacagcgccggcgcgtcacagcccgccggtgtgccgggc
gagttgtgtattggtggtgcgggactggcgcggggctatcgcaaccgggaagaactgacc
cgggaaaaattcttctcttcagaactcgacccgcacggacgcctttaccgcactggggac
ctggtcgtacagcggctggatggcaggctcgagttcctcggccgtatcgatcatcaggtc
aaaatccgtggtttccgggtcgagctgggcgagatcgagagcgccctgcttggcgatgat
atccggcgagcggtggtgatcgctcacaatgatgatttcggcagtcagtatctggcggct
tacctgatcccggtggatggagcgaagatcgatattaccgcattgcgaacccggctgcga
cagacgctgccggaatatatggtaccggcacactttgtcaccctggatgccttcccgatg
acagccaatggcaaagtggatcgcaaggctttcccgccgccgtccgacaacgccgccgcc
ggccaggatccgcaaccgcaaactcagacaccgccggactcagagccagccgggcctgca
ccaatcaaagtgaaagtgcagcagccacggaaagctcctgctccggaacacagcaagtca
actgtgacaccgtccaaggagcagcccaaaaaaacagttctgcgcgaacctgaggctgaa
gttgagcccccacagcagaccgcggtcaagcagacccgggaaattgtcggtgtcgacgct
gtaccgaataatccacctggcaaagcaacaccgtctccggtggaagatgtggtgcgcgca
gtgttccgcgacgtactgaaagtgccgattgaatcggatgaggccagcttctttgacctt
ggcggtcactcactggctgccatccatgccatcgcacggctcaatcagcatttcggtttg
agcctgccgccgacgttgctgtttgattttgccagcatacgccagttgagcagtgcgatt
accgccttccgtgagggacagtctgaacaagaggtcatggaacaggcctcactggatgag
gctaccagtcgccaggtggatgccattctggaagcagtgaaggagaagaaagacgcactg
gacatgccggacttcccccacgggatgaagatgcgggaatcaccatttgccagaaaatgg
ctggccccactatttgcgatcagaagcggtttcctgcgtatcctgttgcagaagttgatc
ctgaagctggaaggcggttctacgttcagtgtcacgatgcgcaagctctatcgccagcac
tacgacatccatgtggctgatttttccagcgtgccgtttgagccgactcgtctgaaaaga
acaaccaggatcggcaaatactgcacgatctaccgcacagtgaatttccagaatgccgat
cacccgcggaatacactgtcgacccatggtctgttctactccagggggctgggcttcagt
acgggctatgaattggatcgagtcactattgaggtgggcaatgatgtctggatcggtgac
ggagccaagatactctatcccactagaaagattggtgacggtgccgtgatcgccgctggc
gcagtggtggtggaggatgtaccgccatatgcgattgtggccggttatccagcccaggtg
gtgcgctatcgcttttcaagggagaccattgccaaactggaatccctgaagtggtgggaa
atgtccgaccgcaatctcttccatgcccggggtgagtttctacgaccattggaaggtgat
cgggtgcactga
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