Microbulbifer aggregans: AUP74_01124
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Entry
AUP74_01124 CDS
T04560
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
micc
Microbulbifer aggregans
Pathway
micc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AUP74_01124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
micc03021
]
AUP74_01124
03019 Messenger RNA biogenesis [BR:
micc03019
]
AUP74_01124
Transcription machinery [BR:
micc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AUP74_01124
Messenger RNA biogenesis [BR:
micc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AUP74_01124
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
Mor
Spore_III_AA
DUF5010
Motif
Other DBs
NCBI-ProteinID:
AOS96588
UniProt:
A0A1C9W619
LinkDB
All DBs
Position
1286264..1287622
Genome browser
AA seq
452 aa
AA seq
DB search
MGKIEQYQTPDPSSKNSGASAPNANRNLNKAIGMNLSELKTKPIEELIEIAKGMGLENLA
RSRKQDIIFNILKRHAKSGEDIYGEGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIR
RFNLRTGDSIAGKIRPPKEGERYFALLKVSEINFDKPENARNKILFENLTPLFPNKRLTL
ECGNGSSEDLIGRIIDLVAPIGKGQRGLIVAPPKAGKTIMLQNMAQAITRNNPECHLIVL
LIDERPEEVTEMQRSVRGEVVASTFDEPPARHVQVAEMVIEKAKRLVEHKKDVVILLDSI
TRLARAYNTTVPSSGKVLTGGVDAHALERPKRFFGAARNIEEGGSLSIIATALVDTGSKM
DEVIFEEFKGTGNMELQLDRKIAEKRVYPAINVRRSGTRREELLMPEGELQRVWILRKLL
HDMDDLAATEFLIDRLKDFKTNDEFFLSMKRK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaattgagcaatatcaaactccagacccctcctcgaaaaattccggcgcgtcc
gcgccaaatgcaaacagaaaccttaataaagcaattggtatgaatctctccgaattaaaa
accaaaccgatcgaagaactgattgaaatcgccaagggcatgggcctcgaaaacctggcc
cgctcgcgcaagcaagacatcatcttcaacatcctcaagcggcacgcgaaaagcggtgag
gatatctacggtgaaggggtgttggagattctgcaggacggttttggttttttgcgctcc
gccgactcttcttacctggcgggcccggatgatatctacgtttccccgagtcagatccga
cgcttcaacctgcgcacgggcgactccattgccggcaagatccgcccaccgaaagaaggc
gagcgttacttcgctctgctgaaggtcagcgagatcaacttcgacaagccggaaaacgcc
cgcaacaagattctcttcgaaaacctcaccccgcttttcccgaacaaacgcctgacgctc
gaatgtggcaacggttcctccgaggacctgatcggccgcatcatcgacctggtcgcgccc
atcggtaaggggcagcgtggtttgatcgtcgcaccgccgaaagccggtaagaccatcatg
ctgcagaacatggctcaggccattacccgcaacaaccccgagtgccacctgatcgtcctg
ttgatcgacgagcgcccggaagaagtcaccgagatgcagcgctccgtacgcggtgaagtg
gtcgcttccacatttgacgagccgccggcccgtcacgtgcaggttgccgagatggtgatc
gaaaaggccaagcgcctggtggagcacaagaaggatgtggtgatcctgctggactccatc
acccgtctggcccgcgcttacaacaccaccgtgccgtcgtccggcaaggtactgaccggt
ggtgtcgacgcccacgcgctggagcgcccgaagcgtttcttcggtgcggcccgtaacatc
gaggagggtggaagtctctccatcatcgccaccgcgctggtggacaccggttccaagatg
gacgaggtgatcttcgaggagttcaagggcaccggtaacatggagctgcaactggatcgc
aagatcgctgaaaagcgtgtctacccggcgatcaacgtgcgccgctccgggacccgccgc
gaggagctgctgatgccggaaggcgagctgcagcgggtatggatcctgcgcaagctgctc
cacgacatggatgacctggcggccaccgaattcttgatcgaccgcctgaaggacttcaag
actaacgacgagttcttcctgtccatgaaacggaaataa
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