Microbulbifer aggregans: AUP74_01404
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Entry
AUP74_01404 CDS
T04560
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
micc
Microbulbifer aggregans
Pathway
micc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
micc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AUP74_01404 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
micc03021
]
AUP74_01404 (rpoA)
03400 DNA repair and recombination proteins [BR:
micc03400
]
AUP74_01404 (rpoA)
Enzymes [BR:
micc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AUP74_01404 (rpoA)
Transcription machinery [BR:
micc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AUP74_01404 (rpoA)
DNA repair and recombination proteins [BR:
micc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AUP74_01404 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AOS96852
UniProt:
A0A1C9W6S5
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All DBs
Position
1585181..1586185
Genome browser
AA seq
334 aa
AA seq
DB search
MQTAVNEFLTPRRIDVTEYNPNHAKVVLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVEHEYSAIEGVQEDVIEILLNLKDIAVVMHGKDQAVLSLSKKGPGAVTAGDIQVDHD
IEIVNPEHVIANITGDVELNLRLTVARGRGYQPADARREDEEETRSIGRLQLDASFSPVR
RVSYSVESARVEQRTDLDKLVLDLETNGTLDPEEAIRRAATILQQQLAVFVDLEDNRPSD
KPAEEPEVDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASLKGDSKLSPL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgctgtcaacgagtttttgacaccgcgtcgtattgacgtcaccgagtacaac
ccgaaccacgccaaagtggttctggagccgctggagcgtggtttcggccacactctgggc
aacgcactgcgtcgcatcctgctgtcctccatgccgggctgcgccgtcactgaagtcgag
attgacggtgttgagcacgagtacagcgcgatcgaaggtgtgcaggaagatgtaatcgaa
atcctgctgaacctgaaagacatcgctgtggtcatgcacggcaaggatcaggctgttctg
agcctgagcaagaagggaccgggtgcggtgaccgccggagatatccaggtagatcacgac
atcgagatcgttaatcccgagcacgtgatcgccaacatcaccggcgacgtggaactcaat
ctgcgtctgaccgtcgcgcgcggccgtggctaccagcccgccgacgcccgtcgtgaggac
gaggaagagacccgttcaatcggccgtctgcagctggatgcatccttcagcccggtgcgt
cgcgtttcttacagtgtggaatccgcacgtgtagagcagcgcaccgacctggacaagctg
gttctggatctggaaaccaatggtaccctggatcctgaagaggctattcgccgcgccgcg
accatcctgcagcagcagctggccgtgtttgtggacctggaggacaaccgtccgtccgac
aagccggctgaagagccggaagtcgatccggttctgctgcgtccggtggacgacctcgag
ctgaccgtgcgttcggccaactgtctgaaggcagaaaacatctactacatcggtgatctg
attcagcgcaccgaagtagagctgctgaagaccccgaacctgggcaagaagtccctgact
gagatcaaggacgttctagcctcgcgcggtctgtccctgggcatgcgtctcgagaactgg
ccgccggccagcctcaaaggcgacagcaagctgagccccctgtaa
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