Microbulbifer aggregans: AUP74_01804
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Entry
AUP74_01804 CDS
T04560
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
micc
Microbulbifer aggregans
Pathway
micc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AUP74_01804 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micc03019
]
AUP74_01804 (deaD)
03009 Ribosome biogenesis [BR:
micc03009
]
AUP74_01804 (deaD)
Enzymes [BR:
micc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AUP74_01804 (deaD)
Messenger RNA biogenesis [BR:
micc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AUP74_01804 (deaD)
Ribosome biogenesis [BR:
micc03009
]
Prokaryotic type
rRNA helicases
AUP74_01804 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
AAA_22
UvrA_inter
Cas3-like_C_2
Flavi_DEAD
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
AOS97235
UniProt:
A0A1C9W7Y0
LinkDB
All DBs
Position
2066552..2068339
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AA seq
595 aa
AA seq
DB search
MTDTPEPIGFDQLNLPTQILSAIQKLGYETPSPIQAQTIPSLLDGRDVLGQAQTGTGKTA
AFALPLLAQLDLSNKRPQALVLAPTRELAIQVAEACQSYAQNLKGFHVAPIYGGADYRGQ
LKQLQRGVQLVVGTPGRVMDHMRRGSLDLSNLKTLVLDEADEMLRMGFIDDVQWVLEQLP
EERQIALFSATMPREIARIARDHLQDPVEVKIKVKTETAETIRQRYWPVGGLHKLDALTR
ILEAEPVDATIIFVRTKNSTVELADKLAARGFASAALNGDMAQNLREQVIDKLKSGKLDI
VVATDVAARGLDVKRISHVINYDIPYDTEAYIHRIGRTGRAGREGDAILFVAPRERRMLR
IIEKATKKPIEQLELPSAKAVNSARMQRFRERITSTLEGSIDLAPYRQLVDEYLSMNETD
PLQVAAALAAMAQGDQPLFVKEQEPKKRRERDEDFEPRGRKQGGHGKDKKVGPPDEGMER
YRIEVGREHGVRPGNIVGAIANEVELESSYIGRIEIYPEFTTVDLPEGMPKEIFQHLKGV
RVSGRNLNISRYEEGKDGPPPRGGKRKPPRSGSGKGGPGKPGAGKPRHRKVKRGE
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatactcccgagcctattggctttgaccagctcaacctgcccacgcaaatcctc
agtgctatccagaagctgggttacgaaaccccctcaccgatccaggcgcagaccattccc
tccctgttggacggccgcgatgtactgggccaggcccagaccggtactggcaagacggca
gcctttgcactgccgctgctggcacagctggacctgagcaacaagcggccccaggcgctg
gtgctggcgccgacccgtgaactggcgatccaggtagcggaagcctgccagtcctatgcc
cagaacctgaaaggtttccatgtggcgccgatctatggtggtgcggattatcgcggtcag
ctgaagcagcttcagcgcggcgtgcagctggtggtgggcactccggggcgtgtcatggac
catatgcgccgcggcagcctcgatctgtccaacctgaagacgttggtacttgatgaggcc
gacgagatgctgcgcatgggctttatcgacgatgtgcagtgggtactggagcagctgccg
gaagagcgccagattgcgcttttctctgccaccatgccgcgggagatcgcccgtattgcc
cgcgatcacctgcaggacccggttgaggtcaagatcaaggtcaagaccgagactgccgaa
accatccgccagcgctactggccggtgggtggtctgcacaagctggacgcgttgacccgg
atcctggaagcggagccggtggatgcgaccatcatttttgtgcgcaccaagaacagcacc
gtggagctggcagacaagctggccgcgcgcggctttgccagtgctgccctgaatggcgat
atggcgcagaacctgcgcgagcaggtgatcgacaagctgaagagcggcaagctggatatc
gtagtggccactgacgtggcggcgcgaggcctggatgtgaagcgcatcagccacgtgatc
aattacgacatcccctacgacaccgaagcctatattcaccgcattggccgtaccggccgc
gccggacgggaaggggatgccatcctgtttgtcgctccgcgtgagcgccgtatgctgcgc
attatcgagaaggccaccaagaagcctatcgagcagctggagctgccgagtgccaaggcg
gtgaactccgcacgcatgcagcgattccgcgaacggattaccagcaccctggagggctcc
attgatctggcgccctaccgccagctggtggatgaatacctgtccatgaatgagacggac
cccctgcaggtggctgcagccctggccgccatggcccagggcgaccagccgctgttcgtc
aaggagcaggagccgaagaaacgccgcgagcgcgatgaggatttcgagccgcgcgggcgc
aagcagggcggtcacggaaaagacaagaaggtgggaccgccggacgagggcatggagcgc
taccgtattgaggtcggtcgcgagcacggcgtacgtcccggcaatatcgtcggtgccatt
gccaatgaggtggaactggaaagttcctacattggccgtatcgaaatctacccggaattc
accacggtagatctgcccgagggcatgccgaaggaaatcttccagcacctgaaaggtgtg
cgtgtttccggccgcaacctgaatatttcccgctatgaagaaggcaaggacgggccgccc
ccgagaggcggaaagcgcaagccgccccgttcgggttccggcaagggcggaccgggcaag
cctggtgcgggtaagccaaggcaccgcaaagtgaagcgcggcgagtaa
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