Microbulbifer aggregans: AUP74_01820
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Entry
AUP74_01820 CDS
T04560
Symbol
sbcB
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
micc
Microbulbifer aggregans
Pathway
micc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
micc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AUP74_01820 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micc03400
]
AUP74_01820 (sbcB)
Enzymes [BR:
micc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
AUP74_01820 (sbcB)
DNA repair and recombination proteins [BR:
micc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AUP74_01820 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AUP74_01820 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AUP74_01820 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AOS97251
UniProt:
A0A1C9W7W8
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All DBs
Position
2090045..2091472
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AA seq
475 aa
AA seq
DB search
MSATTLYWHDYETWGTDPGADKPSQFAGIRTDEDLNVVGEPLMLYCKPADDCLPQPMASL
VTGISPQQALAEGVPELQFIRRILDELGAPGTCGVGYNSLRFDDEVTRHTLYRNLLDPYE
REWRSGNSRWDIIDMVRLTYALRPEGIQWPEREGGVPSFRLEELTAANGIAHEGAHDALS
DVRATIDMARLIRLRQPRLYDYVFRLRSKREAAAMIDLQARRPLLHVSGKVPASQGHLTY
ILPLAAHPVNRNAIIAANLAMDPEPILRLDADALRDRLYTSRDKLGEGELPAGLKLIHLN
RCPVLAPPNMLDDKRAAELGIDKAACEQHWQALRDVDLREKLQQVFVDGDFPERDVEASL
YSGFLADPDRDLCRDLHRALESRGPEALAAPVPFTDKRLPELLFRLRARNFPGTLSAEEQ
QRWQEWRYRRLTDPAAGASITLEPYFEQIAELREQYPEKMQLLDQLEAWGDGLLV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcaaccacactctactggcacgattacgagacctggggtaccgacccaggtgcg
gacaagccatcccagttcgccggcatccgcaccgacgaggacctgaacgtcgtcggtgag
ccgctgatgctctactgcaagcctgcggacgactgcctgccacagccgatggcgagcctg
gtaaccggtatcagcccgcagcaggcgctggccgagggggtgcctgaactgcagtttatc
cgccgtatcctcgacgagctgggcgcgcccggtacctgcggtgtgggctacaacagcctg
cgtttcgatgatgaagtcacccgccacaccctctaccgcaacctgctcgatccctatgag
cgtgagtggcgctcgggtaacagccgctgggacattatcgacatggtccgcctgacctac
gccctgcgcccagagggtatccagtggccagagcgggaagggggcgttccctctttccgg
ctggaagagctgaccgcggccaacggcatcgcccacgaaggggcgcacgatgcgctctct
gatgtgcgtgccaccatcgacatggcccgcctgatccgtctgcgccaaccacggctctac
gactatgtgttccgcctgcgcagcaagcgcgaagcggcggcgatgatcgacctgcaggcc
cggaggccgctgctgcatgtttccggtaaggtgccggccagtcaggggcacctcacttat
atactgccgctggccgcacacccggtgaaccgcaatgccatcatcgccgccaacctcgcc
atggatccggagccgatcctgagactcgatgccgacgccctgcgtgacaggctgtacacc
tctcgagacaagctgggggagggtgagttacctgcggggctcaagctgattcacctgaac
cgatgcccggtgttggcgccgcccaatatgctcgacgacaaacgcgcagccgaactgggt
atcgacaaggccgcctgcgaacaacactggcaggcactacgggatgtggatctgcgtgag
aagctgcagcaggtctttgtggatggggatttcccggagcgcgatgtggaggcgagcctc
tacagtggtttcctggcggatccggaccgggatctctgtcgggacctgcaccgggccctg
gaaagccggggcccggaagcgctggcagcgccggtgccatttacggataagcgcctgccg
gagctgctgtttcgcctgcgggcccgcaatttcccgggcacgctttccgccgaagagcag
cagcgctggcaggagtggcgttatcggcggctgacggacccggcggccggcgccagcatt
acactggagccctatttcgagcagatcgccgagttgcgggagcagtatccggagaagatg
cagctgctggatcagttggaagcctggggagatgggttgctggtctga
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