Microbulbifer aggregans: AUP74_02022
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Entry
AUP74_02022 CDS
T04560
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
micc
Microbulbifer aggregans
Pathway
micc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
micc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AUP74_02022 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
micc03000
]
AUP74_02022 (alkA)
03400 DNA repair and recombination proteins [BR:
micc03400
]
AUP74_02022 (alkA)
Enzymes [BR:
micc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AUP74_02022 (alkA)
Transcription factors [BR:
micc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AUP74_02022 (alkA)
DNA repair and recombination proteins [BR:
micc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AUP74_02022 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_11
HTH_3
RecR_HhH
HTH_23
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AOS97452
UniProt:
A0A1C9W8I6
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All DBs
Position
2323334..2324788
Genome browser
AA seq
484 aa
AA seq
DB search
MRLDPETCARARLARDRRFDGRFFVAVRTTGIFCRPVCPARLPLERNVTYYPTAAEAAQA
GFRPCLRCRPDAAPGSPAWGLVSTTVRRALQLMRSEREAASMETLAERLGVSSRYLRRLF
SEHLGASPQAIWQAERALFAFGLLRDTSLPVADIAFAAGFGSLRRFNAVFKQIYQRTPTE
VRKGSVSVSSGTSDGTLRLFLHYRPPLQWERLLAFLGQRALPGVEQVIDGVYQRSFSLDG
SRGVLRVGHEFSAHRLVVEVQGQVGTSLYQISQRLRRLFDLDADTDEIEKVLGCDPLLAE
QIRRSPGIRLPGAWDPFEYALRAILGQQISVAAATTIAGRLVDRYGGSFRDDVGNVHKLF
PTATQLAGADFSGLGLTRKRAETLRSFVEATLAGRVNFDLPDLEDWCEQVTVLPGIGDWT
AQYIAMRGLSMPDAFPASDLGILKALGGGPDKARPKEALARAEAWRPWRAYGALLLWQSL
QAEN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagactggatcctgaaacctgtgcccgggcccggctggcccgggacaggcgatttgac
ggacgcttttttgtcgcggtgcgcaccaccgggatattctgccggccggtctgtcctgcc
cgcctgccgctggagcgcaatgtcacctattacccgacggccgctgaggccgcacaggcc
ggctttcgcccctgtctccgttgtcggcccgatgccgcgcccggcagccctgcatggggg
ctcgtttccaccacggtgcggagggcgctccagctgatgcggagcgagcgggaggcggcg
tcgatggagaccctggctgaacgccttggggtgagcagccgttatctccgccgtttgttt
tcagagcatcttggcgcgagcccccaggcgatctggcaggcggagagggcgttgtttgct
tttggactgttgcgggataccagtctgccggttgccgacattgcatttgcggcgggattc
ggcagcctgcgccggtttaatgctgtattcaaacagatctaccagcgcacgccgacggag
gtgcgcaaaggcagtgtcagcgtgtcatccggcaccagtgatggcaccctgcggctgttt
ttgcactatcgcccaccgcttcagtgggaacgcctgctcgctttcctgggccagcgggcc
ctgcccggggtggagcaggtgatcgatggtgtctaccagcgaagcttctccctcgatggc
agtcggggtgtgctgcgggtcgggcatgagttttctgcgcaccgcttggtggtcgaagtg
cagggccaggtggggacttccctgtaccagatcagccagcgcttgcgccgactgttcgat
ctggacgcggatacggacgagatcgagaaggtgctgggttgcgaccccctgctggcggag
cagattcgccgcagccccggcattcgcctgccgggtgcatgggatccgtttgagtatgcc
ctgcgggcgatcctgggccagcagatttcggtggcagcggccacgaccattgccggtcgg
ctggtggatcgctatggaggctcgtttcgtgatgacgtcggcaatgtgcacaaactgttt
ccaacagctacccagcttgccggggcggatttcagcgggctcggcctgacccgcaagcgg
gccgaaaccctgcgcagctttgtcgaggcgacgctggccgggcgtgtgaatttcgacctg
ccggacctggaggactggtgtgagcaggtgacggttctccccggtattggtgactggacg
gcccagtacatcgccatgcgcggactatccatgcccgacgccttccccgcctcggacctg
ggaatactgaaagcgcttggtggaggaccggacaaggctcgcccaaaggaagcgctggcg
cgcgccgaggcctggcggccctggcgtgcctatggggcgctgctgctgtggcagtccctg
caagcggagaattga
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