Microbulbifer aggregans: AUP74_02389
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Entry
AUP74_02389 CDS
T04560
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
micc
Microbulbifer aggregans
Brite
KEGG Orthology (KO) [BR:
micc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micc03032
]
AUP74_02389 (topA)
03400 DNA repair and recombination proteins [BR:
micc03400
]
AUP74_02389 (topA)
Enzymes [BR:
micc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AUP74_02389 (topA)
DNA replication proteins [BR:
micc03032
]
Prokaryotic type
DNA Topoisomerases
AUP74_02389 (topA)
DNA repair and recombination proteins [BR:
micc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AUP74_02389 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AOS97791
UniProt:
A0A1C9W9F6
LinkDB
All DBs
Position
2726324..2729041
Genome browser
AA seq
905 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFVVKSSVGHIRDLPTAGSNKQPVDPKERARKAAETR
KLSPEEKEKYKRKKNREQLIKRMGIDPDHDWAAHYEILPGKEKVVSELRKLAENADQIYL
ATDLDREGEAIAWHLREAIGGDDNRYRRVVFNEITKSAIQEAFKDPGRLNINRVNAQQAR
RFLDRIVGYMVSPLLWEKVARGLSAGRVQSVAVRLVVEREREIRAFVPEEYWTISADTET
AKTEPLHLEVKRQAGEAFRPTSEEQASAAAKALQSSEYTVSQRDDKPTSSKPNAPFITST
LQQAASNRLGFSVKKTMMLAQRLYEAGHITYMRTDSTNLSKEAVDSARDFILEKFGKKYL
PESPNSYSSKEGAQEAHEAIRPSDVRMQPNMLSGVERDAERLYNLIWQQFVACQMTPAEF
TSTSVVVTAGDFELRARGRVIRFDGFLKVAPQVSKKDEDLVLPDVKVGEKLALKKLDPKQ
HFTKPPARFSEAALVKELEKRGIGRPSTYASIISTIQDRGYVRLENRRFYAEKMGDIVTD
RLSESFKNLMDYGFTANLEESLDAVADGDRGWKELLNEFYEDFSSRLEKAQSPDGGMRRN
TPTDTDIECSKCGRHMQIRTGSTGVFLGCSGYGLPPKERCTNTMNLVSGEEAVDADKDED
AETRQLRDKRRCAKCGTAMDSYLVDEHRKLHICGNNPDCPGYEVEKGTFKIKGYDGPVIE
CDKCGSDMQLKSGRFGKYFGCTNEECKNTRKLLKNGQPAPPKMDPVPMPELPCQKVDDHY
ILRDGASGLFLAASQFPKNRETRAPLVKELLPHKAEIDPKYSFLFSAPTEDDQGRDTVVR
FSRKTQEQYVQSEEDGKATGWKAFYRDGKWLVESTAKPAAKRKAAPKKKAAAKKAPAKKA
PSKKK
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcactggtcattgtcgaatcaccggccaaagcgaaaaccatcaacaaatac
ctcggcaaggacttcgtggtgaagtccagtgtggggcatattcgcgatttgcccactgcc
ggcagtaacaaacaacctgtcgatcccaaagagcgtgcgcgcaaagcggcagagacgcgc
aagctttcaccggaagagaaagaaaagtacaagcgcaagaaaaaccgcgagcagctgatc
aagcggatggggattgacccggatcatgactgggccgcgcattacgagatccttcccggc
aaggaaaaagtggtcagtgaattgcgcaagctggcggaaaacgcggaccagatttatctg
gcaacggacttggaccgtgagggggaagcgatcgcctggcacctgcgggaggcgattggt
ggtgatgacaatcgctatcgccgggtggtcttcaatgagatcaccaaatccgcgatccag
gaggccttcaaagacccgggccggttgaacatcaatcgtgtaaacgcccagcaggcccgg
cgtttcctcgaccggattgtcggttacatggtctcgccgctgctgtgggaaaaggttgcc
cgcggtctctccgcgggtcgggtccagtcagtggccgtgcgcctcgttgtggagcgcgag
cgagaaatccgtgcctttgtgcccgaggaatactggaccatctcggccgatactgagact
gccaagacggagccgctgcacctggaggtcaagcgccaggccggtgaggcgtttcgcccc
accagtgaggagcaggccagtgccgcagccaaggccctgcagtccagcgagtacaccgtt
tcgcagcgggacgacaagccgaccagctccaaacccaatgcgccgttcattacctcgacg
ctacagcaggcggcgagcaaccggcttggcttcagtgtcaaaaagaccatgatgctggcg
cagcgcctctacgaggcaggccacatcacctacatgcgtacagactccaccaacctgagc
aaagaggcggtggattcggctcgggacttcatcctcgagaagttcggtaaaaaatacctg
ccggagtctcccaacagctacagcagcaaagagggcgcacaggaggcacacgaggctatt
cgcccatcagatgtacgcatgcaaccgaatatgctgagcggcgtcgagagggatgcagag
cggctttataacctcatctggcaacagttcgttgcctgtcagatgacacctgcagagttc
acctcgacatcggtagtggtgacggcaggggatttcgaactacgcgctcgcggtcgggtc
atccgttttgacggcttccttaaagtcgcgccgcaagtgagcaagaaagatgaggacctg
gtactgcccgacgtgaaagttggggagaagctggcattgaaaaagctcgaccccaagcag
catttcaccaaaccaccggcgcgtttcagcgaggccgctctggtaaaagagctggaaaag
cgcggtatcggtcgcccatcgacctatgcctcgattatctccaccattcaggatcgcggc
tatgtccgtcttgagaatcgccgtttctatgctgaaaaaatgggcgatattgttacggac
cgtttgagcgagagcttcaagaacctgatggattacggctttacggccaacctggaggag
tccctggatgccgtagccgacggggatcggggctggaaggagctgctcaacgagttctat
gaagatttctcctcgcggctggagaaggcgcagtccccagacggcggcatgcgtcgcaat
acgcccaccgataccgatatcgagtgcagcaagtgcgggcgccatatgcaaatccgcacc
ggttccacgggggtgttcctgggttgctcaggttacgggctgccgcccaaggagcgctgc
accaataccatgaacctggtttccggtgaggaggcggttgacgctgacaaggatgaagac
gccgaaacccgtcaactacgggataagcggcgctgtgccaagtgcggcaccgccatggac
agctatctcgtggatgagcaccgcaaactgcatatctgcggtaacaaccctgattgcccg
ggctacgaggtggaaaagggcacgttcaagatcaaaggctacgacggtccggtcattgaa
tgtgacaagtgcggtagtgatatgcagctcaaatcgggccgcttcggcaagtatttcggc
tgcaccaacgaggaatgtaagaacacccgcaagctgctcaagaacgggcagcccgcaccg
ccgaagatggatccagtacctatgccggagctgccatgccagaaggtggatgatcactac
attctgcgtgacggcgcatcgggactgtttctggctgcgagccagttcccgaaaaaccgc
gagaccagggctccgctggtaaaagagctgctcccgcacaaagcagagattgatcccaag
tacagtttcctgttttctgcaccgactgaagatgatcagggcagggacacggtggtgcgc
ttcagtcgtaaaacccaggagcagtacgtacagtctgaggaagacggcaaggcgaccggc
tggaaggctttttatcgcgatggcaaatggttggtagagtccacggccaagcccgctgcc
aagcgaaaagccgcacccaagaagaaggccgcagcgaagaaagcaccggcgaagaaggcg
ccgagcaagaagaaatga
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