Microbulbifer aggregans: AUP74_02662
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Entry
AUP74_02662 CDS
T04560
Name
(GenBank) PD-(D/E)XK nuclease superfamily protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
micc
Microbulbifer aggregans
Brite
KEGG Orthology (KO) [BR:
micc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micc03400
]
AUP74_02662
Enzymes [BR:
micc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUP74_02662
DNA repair and recombination proteins [BR:
micc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AUP74_02662
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AOS98058
UniProt:
A0A1C9WA79
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All DBs
Position
3029612..3032338
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AA seq
908 aa
AA seq
DB search
MLQPAFAALDILARLPENSLLLTPNNRLRNRCQQVYAYHQGERGNWAPPPVESLRGWLDS
VWVRLQQSGWAPAWKPVLNAEQRQLLWQRALDQTLERQLLNSQQLCRDADTALSQLFQWR
LLDDLDDLDAVITAPLEQFALSRAEYPLFELIDAFNRELKAQDAITPDQRDLLVAEAFRS
GVIEPLKEIHLAGFAQLPPIFRHIIEQACAEVVEHQQLHRAGSRAIASCPDLESELYQAA
RWCAKLLEEDPHTSIGIVVNNLGQCRDQVESIFARVLEPQALDPRQPRYTLPFNFSAGTP
LAQTPIGAGALQLLELLKDEWAYAELRGLLFSPFWGLAVAGQEDDDSTIDSEFWLRSALF
RTLEKRELRTVRGDVLRSTAEKLATRIGLESPQLPRQLELIGDRARRWRRAPAEVWALRF
SQTLEALGWPGPRNPDSQEYQQLNLWEQALEDFAALTPFAGSLTLMQALQHLRRIASRTP
FQAETRDGPVQILGVLEAAGLSFDHLRLVGFGQQQWPPAPAPNPLLPVQWQKHWQMPRAS
AERELELARQLTNDLLEASADVVVSYAREADGVEQALSSLFPDALQGDAFDTDPLHEHWQ
SLQQNGALERQADHRFPPLQPAECRPVRGGSGVLKNQALSPLNAQLHYRLGATRFNEPTL
GLNPAERGKLVHEALAVFWQRCGNSAALAALEDEQRRDQISSAAESAIESLRHQHRHLPH
GFWLLEHQRLTRLLEQWLELEKSRPAFTVEKVEWAQEAEIGGLQMQLRLDRLDTLPDGTQ
LVIDYKTGQTTVSDWLQERVREPQLPLYALTQPESRAIAFAQVRWGDCKWKGSGDLEQPI
DGIKAVADLQKDGPLTTWHDLTEHWQQSLTQLAEEYRGGYASLKFDRPADNNRDLWPLNR
WPEREVRK
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaccggcatttgccgccctcgacatccttgcccgactgcccgagaacagtttg
ctgctgacacccaacaaccggctgcgcaatcgctgccagcaggtttatgcctatcaccag
ggcgagcgcggcaactgggcgccgccaccggtggagtcgttaagggggtggctggattcg
gtatgggtccggcttcagcaatcgggctgggcaccggcctggaaaccggtgctgaacgca
gaacagcggcaattgctctggcaacgtgctctcgaccagaccctggaacgtcaattgctg
aacagccagcagctctgccgggatgcggatacggcactgtcccagctgttccagtggcga
ctgttggatgacctggacgatctcgacgctgtgattacggcgccgctggagcagttcgcc
ctgtcgcgggcggaatatccactgtttgaactcatcgacgctttcaaccgggaactgaaa
gcccaggacgcaatcacaccggaccagcgggatttactggtggcggaagcgttccgttcc
ggagttattgagccgctcaaggaaatccatctggcagggtttgcgcagttgccccccatc
ttccggcatattatcgagcaggcctgcgctgaggtcgtcgagcaccagcagctccacagg
gccggttcccgggcgatcgcttcatgtcctgacctggaaagtgagctttatcaggcggcc
cgctggtgcgcaaaattgctggaagaagatccccacaccagtatcggcatcgtggtgaac
aacctcggccagtgccgggaccaggtggagtctattttcgcccgtgttctggagccccag
gcgctcgatccgcgccagccccgctacaccctgcctttcaacttttccgccggtacgccc
ctggcccagacgcccattggcgcgggtgccctgcaactgctggagctactgaaggacgaa
tgggcgtatgccgagcttcgcggtcttctgttcagccccttctggggcctggctgtggcc
ggccaggaggacgatgactctacgatcgacagcgagttctggctgcggagcgccctgttc
cgcaccttggaaaaacgcgagctgcgcactgttcgcggagatgttctgcgcagcaccgca
gaaaaactcgcaacgcgcatcggcctggagtctccgcaactaccgagacagctcgaactc
atcggcgatcgtgccagacgatggcggcgggcgcccgcggaagtctgggccctgcgattt
tcacaaacgctggaagcgttgggctggccaggcccgcgcaacccggacagccaggaatac
cagcagctcaatctctgggaacaggccctcgaagacttcgccgcgctgacaccttttgcc
ggcagcctcaccctgatgcaggcactccaacacctgcgccgcatcgccagccggacaccg
ttccaggcggagacccgcgatggccctgtgcagattctgggcgtgctcgaggccgccggt
ctgtccttcgatcacttgcgcctggtcggttttggccagcagcagtggccgccggcgccg
gcgcccaacccactgctgccagtgcagtggcagaagcactggcagatgcccagggccagc
gcagagcgggaactcgagctggcccgacaactgaccaacgacctgctcgaagccagcgca
gacgtcgtggtgagttatgcccgcgaggcagatggtgtggagcaggcgctgagcagcctg
ttcccggacgccctccagggcgatgcctttgacactgatccattgcacgagcactggcag
agcctgcagcaaaacggggcgctcgaacggcaggccgaccatcggttcccgccactgcaa
ccggcggagtgccggcccgtgcgcggtggttccggggttctcaagaaccaggctctgagc
ccgctgaacgcccaactccattaccggctgggggccacccgcttcaacgagccgaccctc
ggtctcaacccggccgaacggggaaagctggtccatgaggcactggccgtattctggcag
cgatgtggaaactcggcggcactggccgcgctggaagacgaacagcgccgcgaccagatc
agcagcgccgcagagtccgccatcgaatccctccggcaccagcaccgacacctgccccac
ggcttctggcttttggaacaccagcggctgacgcggctgctggagcaatggctcgagctg
gaaaaatcacgccccgcattcacggttgaaaaagtcgagtgggcccaggaagctgagatt
ggcggcctgcagatgcaactgcggttggaccgtctcgacacccttcccgatggcacccag
ctggtgattgactacaagacaggccagaccacggtcagtgactggctccaagagcgagtc
cgggaaccgcagctgccgctctacgcgctcacccagccggaatcacgcgctatcgctttc
gcacaggttcgctggggcgactgtaagtggaagggctccggtgacctggaacagcccatc
gacgggatcaaggcggtggcagacctgcaaaaggatgggccattgaccacctggcacgat
ctcaccgaacactggcaacagagcctcacccagctggccgaggagtaccgcggcgggtat
gccagcctgaagttcgatcgtcccgccgataacaaccgggatctgtggcccctcaaccgc
tggccggaaagagaggtgcggaagtga
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