Microbulbifer aggregans: AUP74_02980
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Entry
AUP74_02980 CDS
T04560
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
micc
Microbulbifer aggregans
Brite
KEGG Orthology (KO) [BR:
micc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micc03032
]
AUP74_02980 (ihfB)
03036 Chromosome and associated proteins [BR:
micc03036
]
AUP74_02980 (ihfB)
03400 DNA repair and recombination proteins [BR:
micc03400
]
AUP74_02980 (ihfB)
DNA replication proteins [BR:
micc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AUP74_02980 (ihfB)
Chromosome and associated proteins [BR:
micc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AUP74_02980 (ihfB)
DNA repair and recombination proteins [BR:
micc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AUP74_02980 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AOS98347
UniProt:
A0A1C9WB35
LinkDB
All DBs
Position
complement(3381259..3381567)
Genome browser
AA seq
102 aa
AA seq
DB search
MTKSELIERIALRLDQLPVKDVELAVKVMLDSMSDVLSQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDAVQLAGKYVPHFKPGKELRDRVNQSMHEETVSEV
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcggaactgatcgaaaggatcgcgttgaggctggaccagctgccagtgaaa
gatgtggagctggcggtcaaggtgatgttggattcgatgtccgatgttctctctcagggg
gagcgcatcgagattcgcggctttggcagtttctccctgcactatcgggcaccgcgcacc
gggcgcaatcccaagaccggggatgcggtgcagctagcgggcaaatatgtgccgcatttc
aagccgggtaaggaattgcgtgatcgggtaaaccagagcatgcatgaagagacggtatct
gaggtatag
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