Microbulbifer aggregans: AUP74_02995
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Entry
AUP74_02995 CDS
T04560
Symbol
rpoD_2
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
micc
Microbulbifer aggregans
Pathway
micc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
micc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AUP74_02995 (rpoD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
micc03021
]
AUP74_02995 (rpoD_2)
Transcription machinery [BR:
micc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AUP74_02995 (rpoD_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
TraL_transposon
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AOS98362
UniProt:
A0A1C9WB32
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All DBs
Position
3397935..3399056
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AA seq
373 aa
AA seq
DB search
MYSRDEAWLKDTDELVSGSQPEKAMASSEPETEQVKQQAEPSGESGSTPMQSYLKHLYRL
DLLTPEEEHTTTCLLRELEDKIIALLQKRGVELVDLRSEGVEQRGSTGAYDHGLIIAKAE
TLMEKGKISQRDRTALRSLLRRFQEQRKKLIQCNLRLVIAIAKRFRNPAVPFIDLIQEGN
VGLMKAIERFKPQMGYRFSTYAYWWIQQEIQLALRRNDDIVRQPANVQDDLRAIYRAISE
LRSRGSAASDEHIATQAGLDLERVQSLLKLPGPTGSLDDPVAEDQSSTKLDYAPADEIYN
TDELVTNQELAERLREAVERLPPRQRTVLNLRYGLISDRDCSFRVIGEQLGLSQERARQL
HSDAIRQLRRQWR
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtactcaagggatgaagcatggctgaaggacacagacgaactggtttccggtagtcag
cccgaaaaggcaatggcaagtagtgaaccggaaactgaacaggtaaaacagcaggccgaa
ccgtccggggaatccggcagtacgccgatgcagagctatctcaagcatctgtaccggctc
gacctgctcactccagaggaggaacacacgaccacctgcctgttgcgggagctggaagac
aagatcattgcactgctgcaaaagcgcggtgtggaactggtcgacctgcgcagtgaaggt
gtagaacagcgaggcagcaccggggcctacgaccacggcctgatcatcgccaaggcggag
acactgatggagaaagggaaaatctcccagcgtgaccgcaccgctctgcgcagcctcctg
cgccgctttcaggagcagcgcaagaagcttattcaatgcaacctccgcctcgtgatcgcg
atcgccaaacggtttcgcaatcccgcggtgccatttattgatctgattcaggagggcaat
gtcggcctgatgaaggccatcgagcgcttcaaaccacagatgggataccgcttttccact
tatgcctattggtggatccagcaggaaatccagctggcgctgcgccgcaatgacgacatc
gtgcgacaaccggcaaacgttcaggatgacctgcgagcgatttatcgcgcgatcagtgaa
cttcggtcccgtggctccgccgcctccgacgaacacatcgcgacgcaggcaggcctcgat
ctggaacgggtacagagtctgctcaagttgcccggtcccaccggatctctcgacgatccg
gtagccgaggaccagagcagtaccaaactggattacgcgccagccgatgagatctacaac
acggatgaactggtcaccaaccaggagctcgccgagcgcttgcgtgaagctgtggaacgt
ttgcccccgcgccagcgtaccgtgctcaatctgcgctacggattgatctcagacagggac
tgctccttccgcgtcattggcgaacagctggggctcagtcaggagcgtgcccgtcagctg
cactcggatgccatccggcaactgcggcgacagtggcgctaa
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