Microbacterium sp. RG1: EHF32_00560
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Entry
EHF32_00560 CDS
T10164
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mice Microbacterium sp. RG1
Pathway
mice03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mice00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EHF32_00560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mice03400
]
EHF32_00560
Enzymes [BR:
mice01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EHF32_00560
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EHF32_00560
DNA repair and recombination proteins [BR:
mice03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EHF32_00560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QCQ15342
UniProt:
A0A4P8KLQ8
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All DBs
Position
complement(125128..125991)
Genome browser
AA seq
287 aa
AA seq
DB search
MPEMPEVQGLVDFLGARLTGLAISQARVSAISALKTYDPPIDVLVGAHVESVVRRGKFVD
IATDAGVHLVFHLAKAGWLRWHDALPTTVIKPGRSPIALRVGFADGSGFDLTEAGTKKSL
AVSVVRDPADVPGVARLGPDPLEPAFTRDALAALLAGRRTQIKGVLRDQSIIAGIGNAYS
DEILHVARLSPYALAATLDDAEIDTLYTATIETLRDAVGAASGKPPAELKDAKRRGMRVH
GRQGEACPVCGDIVRSVFFADNSLEYCATCQTGGKVLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagatgccggaggtccagggactcgtcgacttcctcggcgcgcgcctgacgggc
cttgcgatcagccaggcacgcgtcagcgcgatctccgcactcaagacatacgacccgccc
atcgacgttctcgtgggcgcccacgtcgaatcggtcgtccgccgtggcaagttcgtcgac
atcgccacggatgcgggagtgcacctcgtcttccacctcgcgaaggcgggctggctgcgc
tggcacgacgccctgccgacgacggtgatcaaaccgggccgctcccccatcgcgctgcgg
gtgggcttcgccgacggctcggggttcgatctgaccgaggccggcacgaagaagtcgctc
gccgtgtcggtggtgcgcgaccctgctgatgtccccggcgtcgcccggctcggtccggac
ccgctggagcccgccttcacgcgcgacgcgctggcggcgcttctggctggtcgtcgcaca
cagatcaagggggttctgcgggatcaatcgatcatcgccgggatcggcaacgcctactcc
gacgagatcctgcacgtcgcccggctctcgccgtacgcgttggcagccacgctcgacgac
gccgagatcgacaccctgtacaccgcgacgatcgagaccctgcgcgatgcggtcggggcc
gcatccggcaaaccgccggccgagctgaaagacgcgaagcggcgtgggatgcgggtgcat
ggccggcagggcgaggcgtgccccgtgtgcggcgacatcgtgcggtcggtgttcttcgcc
gacaactcgctcgagtactgcgccacgtgccagaccggcggcaaggtactggcggatcgg
cggctgtcgcgtctgctgaaatga
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