Microbacterium sp. RG1: EHF32_02970
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Entry
EHF32_02970 CDS
T10164
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mice Microbacterium sp. RG1
Pathway
mice03030
DNA replication
mice03430
Mismatch repair
mice03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mice00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EHF32_02970
03430 Mismatch repair
EHF32_02970
03440 Homologous recombination
EHF32_02970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mice03032
]
EHF32_02970
03400 DNA repair and recombination proteins [BR:
mice03400
]
EHF32_02970
Enzymes [BR:
mice01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EHF32_02970
DNA replication proteins [BR:
mice03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EHF32_02970
DNA repair and recombination proteins [BR:
mice03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EHF32_02970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QCQ15776
LinkDB
All DBs
Position
633238..636783
Genome browser
AA seq
1181 aa
AA seq
DB search
MSGGCAYPGQVADSFVHLHVHSEYSMLDGAAKIGAMTQAASEYGMPAIAVTDHGNTFAAF
EFYRAAQGAGVKPIIGLEAYVTPGTHRSDKSRVAWGSPDQKSDDVSGSGAYTHMTMWSQT
TEGMHNLFRLSSLSSMEGYYFKPRMDRELLQTYGKGLIATTGCPSGEVQTRLRLGQYDAA
RAAAAEFQDIFGKENYFAEIMDHGLSIERRVMSDLIRLAKDLDIPLVATNDSHYTHQHEA
DAHEALLCVQSGSTLDDPNRFKFDGDGYYIKTAQEMRQLFRDHPEACDNTLLIAERCEVE
FNTSANYMPRFPVPDGETEDSWLIKEVEKGLHYRYPQGIPDKVRKQAEYETGIILQMGFP
GYFLVVADFINWAKDNGIRVGPGRGSGAGSMVAYAMKITDLDPLEHGLIFERFLNPDRVS
MPDFDVDFDDRRRGEVIEYVTEKYGSERVAQIVTYGTIKSKQALKDAGRVLGFPFSMGEK
LTKAMPPAVMGKDMELGGMFNKEHPRYKEASEFRTLIESDPEAKTVFDRALGLEGLKRQW
GVHAAGVIMSSEPLLDIIPIMRREQDGQIVTQFDYPSCETLGLIKMDFLGLRNLTIISDA
LDNIRSNRGEELDLEHLELDDRPAYDLLTRGDTLGVFQLDGGPMRSLLRLMKPDNFEDIS
AVIALYRPGPMGANSHTNYALRKNGLQPITPIHPELEEPLRDILDTTYGLIIYQEQVMAI
AQRVAGFSLGQADILRRAMGKKKKSELDKQYEGFSGGMKERGFGDGAVKALWDILLPFSD
YAFNKAHSAAYGLVSYWTAYLKAHYPAEYMAALLTSVGDSKDKMAIYLNECRRMGIRVLP
PDVGESINFFAAVGDDIRFGLGAVRNVGSNVVDGIVASREKEGFASFHDFLAKVPMHVAN
KRTVESLIKAGAFDSMGHTRRALLEIHEDATEQAVLDKRREANGEVGFDFDSLWGDDEPQ
QVSKVPERPEWTKKDKLAFEREMLGLYVSDHPLAGLEIPLAKHASTSIHDLLSSESVQDG
DQVTVAGLVTSVQHRVAKQSGNPYGMITVEDFNGEVTVMFMGRTYTEFQSALQADSILVV
RGRVSRRDDGLNLHAQSCFSPDLGAVDATSALVLVVPEQKATQSVVEELAAVLHRHPGET
EVTLKLHRAGTAKVFEVPHPVTISADLFGDLKGLLGPSCLG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggggctgcgcgtaccctggacaggtggcagactccttcgttcacctccatgtg
cacagcgagtactcgatgctcgacggcgccgccaagatcggcgcgatgacgcaggcggcg
tccgaatacgggatgccggcgatcgccgtcaccgaccacgggaacaccttcgcggcgttc
gagttctaccgcgccgcgcagggcgcgggcgtgaagccgatcatcgggctcgaggcctac
gtgactcccggaacgcaccgcagcgacaagtcgcgcgtggcctggggctcgcccgaccag
aagagcgacgacgtatcgggttcgggtgcgtacacccacatgacgatgtggagtcagacc
accgagggcatgcacaacctcttccggttgagctcgctgtccagcatggaggggtactac
ttcaagccccgcatggaccgcgagctcctccagacctacggcaaggggctcatcgcgacg
acgggctgcccctccggcgaggtgcagacgcgcttgcgtctggggcagtacgacgcggcg
cgcgcggccgcggcggagttccaagacatcttcggcaaggagaactacttcgccgagatc
atggaccacggcctctccatcgagcgacgtgtcatgagcgatctgatccgcctggcgaag
gatctcgacatcccgctcgtcgcgacgaacgactcgcactacacccaccagcacgaggcc
gatgcgcacgaggccctgctctgcgtgcagtccggatccaccctcgatgaccccaaccgc
ttcaagttcgacggtgacggctactacatcaagaccgcgcaggagatgcgtcagcttttc
cgtgatcacccggaggcgtgcgacaacaccctgctgatcgcagagcgctgcgaggtcgag
ttcaacacctccgccaactacatgccgcgattccccgtgcccgacggcgagaccgaagac
agctggctcatcaaagaggtcgagaaggggctgcactaccgctatccgcagggcatcccc
gacaaggtgcgcaagcaggccgaatacgagaccggcatcatcctgcagatgggattcccc
ggctacttcctcgtggtcgccgacttcatcaactgggccaaggacaacggcatccgggtc
ggtcccggtcgcggctccggcgccggatccatggtcgcctacgcgatgaagatcaccgat
ctggaccctctcgagcacgggctcatctttgagcgcttcctcaaccccgaccgcgtctcc
atgcccgacttcgacgtcgacttcgacgatcgtcgccgcggcgaggtgatcgagtacgtc
accgagaagtacggctcggagcgcgtcgcccagatcgtcacgtacggcacgatcaagtcg
aagcaggcgctgaaggatgcgggccgcgtgctcggcttcccgttctccatgggagagaag
ctcaccaaggccatgccccccgccgtcatgggcaaggacatggagctcggcggcatgttc
aacaaggagcatccgcgatacaaggaggccagcgagttccgcacgctcatcgagagcgac
cccgaggcgaagacggtcttcgaccgcgcgttggggctcgagggcctgaagcgtcagtgg
ggcgtgcacgcggccggcgtcatcatgtcgtcggaaccgctgctggacatcatcccgatc
atgcgccgcgagcaggacggccagatcgtcacgcagttcgactatccgtcttgcgagacg
ctcgggctgatcaagatggacttcctcgggctgcgaaatctcacgatcatctccgatgcg
ctcgacaacatccgcagcaaccgcggcgaggagctcgacctcgagcatctcgagttggac
gaccggcccgcatacgacctgctcacccgcggcgacacgctcggcgtgttccagctcgac
ggcgggcccatgcggtccctcctgcggctcatgaagcccgacaacttcgaagacatctcg
gccgtcatcgcgctgtaccggcccgggcccatgggggcgaactcgcacaccaactacgcc
ctgcgcaagaacgggctgcagcccatcacccccatccatcctgaactcgaagagccgctg
cgagacatcctcgacacgacctacggcctgatcatctatcaggagcaggtcatggcgatc
gcgcagcgagtggccggcttctcgctcggtcaagcagacatcctccgccgcgcgatgggc
aagaagaagaagtccgagctcgacaagcagtacgagggcttctcgggcggaatgaaggaa
cgcgggttcggcgacggcgcggtcaaggcgctgtgggacatcctgctgcccttctccgac
tacgccttcaacaaagcgcactccgcggcctacggcctggtgtcctactggacggcttat
ctgaaggcgcattaccccgccgagtacatggcggcgctgctgaccagcgtcggcgactcc
aaagacaagatggcgatctacctgaacgagtgccgtcgcatggggatccgcgtcctgcct
ccggatgtgggggagtccatcaacttcttcgccgccgtcggcgacgacatccgcttcggg
ctcggagcggtgcgcaacgtcgggtcgaacgtcgtcgacgggatcgtcgcctcccgagag
aaggagggcttcgcctccttccacgacttcctcgcgaaggtgccgatgcacgtcgcgaac
aagcgcaccgtcgagtcgctcatcaaggccggcgcgttcgactccatgggccacacccgg
cgtgcgctgctggagatccacgaggacgcgaccgaacaggcggtgctcgacaaacggcgc
gaggccaacggcgaggtcgggttcgacttcgacagtctgtggggcgacgatgagccccaa
caggtctcgaaggtgccggagcggcccgaatggaccaagaaggacaagctggccttcgag
cgggagatgctcggactctatgtgtccgaccacccactcgccggtctcgagatcccgctc
gcgaagcatgcctcgacctcgatccacgacctgctgtcctcggagagcgtgcaggacggc
gaccaggtcacggtggcgggcctggtcaccagcgtccagcatcgtgtggcgaagcagagc
ggcaatccgtacggcatgatcaccgtcgaggatttcaacggcgaggtcaccgtgatgttc
atgggtcgtacgtacacggagttccagtcggcgctgcaggccgattcgatcctggtcgtg
cgggggcgcgtgtcacgccgggacgacggattgaacctgcacgcccagagctgcttcagt
ccggatctgggagcggtggacgccacatccgctctcgtcctcgtggtccccgagcagaaa
gcgacgcagtccgtggtggaggagctggccgccgtgctgcatcgccacccgggcgagacc
gaggtgacgctgaagctgcaccgcgcgggcaccgcgaaggtgttcgaggtgccgcatccg
gtcacgatcagcgccgatctgttcggcgacctcaagggcctgctcggtcccagctgcctg
ggttga
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