Microbacterium sp. RG1: EHF32_04430
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Entry
EHF32_04430 CDS
T10164
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mice Microbacterium sp. RG1
Pathway
mice03030
DNA replication
mice03410
Base excision repair
mice03420
Nucleotide excision repair
mice03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mice00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EHF32_04430 (polA)
03410 Base excision repair
EHF32_04430 (polA)
03420 Nucleotide excision repair
EHF32_04430 (polA)
03440 Homologous recombination
EHF32_04430 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mice03032
]
EHF32_04430 (polA)
03400 DNA repair and recombination proteins [BR:
mice03400
]
EHF32_04430 (polA)
Enzymes [BR:
mice01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EHF32_04430 (polA)
DNA replication proteins [BR:
mice03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EHF32_04430 (polA)
DNA repair and recombination proteins [BR:
mice03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EHF32_04430 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EHF32_04430 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QCQ16033
UniProt:
A0A4V1EQ01
LinkDB
All DBs
Position
930211..932856
Genome browser
AA seq
881 aa
AA seq
DB search
MTDSEKPTLLVVDGHSLAFRAFYALPVDNFTTKDGQHTNGVYGFLSMFVNLLKAEKPTHL
AVAFDTSRVSFRTREYPEYKATRSETPPEFSGQIPLLQECLRAMNVTVLTREDIEADDIL
ATLATEGVAAGYDVLVCSGDRDTIQLVTDEVTLLYPSVQGVSQLKRYTPETVRERYGVAP
AQYPEIAALVGETSDNLPGVPKVGEKTAVKWLTQWGSLDELLANADKVTGVVGNNLREHI
DDVRRNRALNRLLTDVELPVTPEDLAVRPIDAQGVRDIFARLEFRTLLPRVFEATGADAA
GAAADEAPVVAAPSPVEATDPAMLSAWLDEAGDAEVGVTVVLGASVPVRIGLARASGVIE
AGWSDGVAEALAPWLASDRPKTFTDAKGQVKALRRAGLTVAGVAFDTLLAGWLIRPSLPD
KSLGDLVDRYLGEKLPEADPSQLVPETEGATPGQLAWYTIRVAEPLRAALGEGPSSVLRD
IELPTLLALADMELAGVAVSHDVLSGFSAELAERADGLAQRAYAAIDREVNLGSPKQLQE
VLFEQLQLPKTRKTKTGYSTDAAVLADLQESHPHPFLDLLLQHREATKLRQIIETLDAAI
ASDGRIHTTYLQTGSQTGRLSSTDPNLQNIPIRTEESRRIRSAFQVGAGYETLLTADYSQ
IEMRIMAHLSEDPGLIEAFNTGEDLHRFVGARVFGVTPEEVTSQMRTKVKAMSYGLVYGL
SAFGLSKQLRIEQSEAKQLMGEYFARFGAVRDYLRASVEKAREDGYTETIFKRRRPFPDL
ASPNRVLRENAERAALNAPIQGSAADIMKIALFRIHTEFQERRLASRVLLQIHDELVVEV
AAGEWDQVEEIVRARMGDAAQLTVPLDVQIGRGADWNAAGH
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
gtgacggactccgaaaagcctactctgttggtcgtcgacggccattcgctcgccttccgg
gccttctacgcccttcccgtcgacaacttcacgacgaaggacgggcagcacaccaacggg
gtctacggcttcctttcgatgttcgtgaacctgttgaaggccgagaagccgacgcacctt
gcggtcgccttcgacacctcgcgcgtctcgttccgtacccgggagtaccccgagtacaag
gcgacccgcagcgagaccccgccggagttctccgggcagatcccgctgctgcaggagtgc
ctgcgagccatgaacgtgacggtgttgacgagagaggacatcgaggccgatgacatcctc
gcgaccctggccacggaaggggtcgctgccggctacgacgtgctcgtctgctccggcgac
cgtgacacgatccagctcgtgaccgacgaggtgacgctgctctaccccagcgtgcagggc
gtctcccagctcaagcgttacacgcccgagacggtacgggagcgctacggggtggcgcct
gcgcagtaccccgagatcgcggcgctggtgggggagacgagcgacaacctgccgggcgtg
cccaaggtcggtgagaagacggccgtgaagtggctcacgcagtggggatctctcgacgag
ctgctggccaacgccgacaaggtcaccggcgtcgtgggcaacaacctgcgcgagcacatc
gacgacgtccggcgaaaccgagctctgaaccgtctgctcacagacgtggagctgcccgtg
acgccggaggacctcgccgtgcgtccgatcgacgcgcagggtgtgcgtgacatctttgcg
cggctcgagttccgcacgctcctgccgcgcgtgttcgaggccaccggagcggatgcggca
ggcgccgccgccgacgaggcacctgtcgtcgccgccccgtcccccgtggaggcgaccgac
cccgccatgctcagcgcctggctcgacgaggccggggacgcggaggtcggagtgaccgtc
gtgctgggtgcctcggtgcccgtgcgcatcgggctcgcccgcgcctccggagtgatcgag
gcgggctggagcgacggcgtcgcagaggccctcgctccatggctcgcctccgaccgaccc
aagacgttcaccgacgccaagggccaggtgaaggcgctgcggcgcgcgggactcacggtc
gccggtgtggcgttcgacacgctcctcgccggctggctgatccgtccgagccttcccgac
aaatcactcggcgacctcgtcgaccgctacctcggagagaagctccccgaggccgatcca
tcgcagctcgtccccgaaaccgagggagcgacccccggtcagctcgcctggtacacgatc
cgcgtggccgaacctctgcgcgccgccctgggcgagggcccgtcctcggtgctcagagac
atcgagctgccgacgctgctcgccctcgccgacatggaactcgcgggcgtggcggtgtcg
cacgacgtgctctccggattctcggccgaactcgccgagcgtgcagacggcttggcgcag
cgcgcctatgcggcgatcgaccgcgaggtgaacctcggctctccgaagcagctgcaggag
gtcctcttcgagcagctccagctgccgaagacccgcaagacgaagacgggatactcgacg
gatgcggccgtcctggccgatctgcaggagtcgcacccgcatccgttcctcgacctgctg
ctgcagcaccgtgaagcgacgaagctgcgtcagatcatcgagacgctggatgcggcgatc
gcatccgacgggcggattcacacgacctatctgcagacggggtcgcagacgggccgtctg
tcgagcaccgaccccaatctgcagaacattccgatccgcaccgaggagagccgccgcatc
cgctccgccttccaggtgggcgcaggctacgaaaccctcctcaccgccgactactcgcag
atcgagatgcgcatcatggcgcacctctcggaggaccctggtctgatcgaggcgttcaac
accggcgaagatctgcaccgtttcgtcggtgcgcgcgtgttcggcgtgactcctgaggaa
gtcacgtcgcagatgcgcacgaaggtcaaggcgatgtcatacggactcgtctacggtctg
tctgcattcggcctctcgaagcagctgcgcatcgagcagtccgaggccaagcagctgatg
ggcgaatacttcgcacggttcggtgccgtgcgcgactacctgcgcgcatccgtcgagaag
gcccgggaagacggctataccgagacgatcttcaagcggcgccgtccgttcccagacctc
gccagccccaaccgggtgctgcgcgagaacgcggagcgtgcggcgctcaacgcccccatc
caggggagcgcggccgacatcatgaagatcgccctgttccgcatccacacggagttccag
gagcgccggctggcctcgcgcgtgctgctgcagatccacgatgagttggtcgtcgaggtc
gcagcgggggagtgggaccaggtcgaggagatcgtgcgcgcgcgcatgggggatgcggcg
cagctcaccgtcccgctcgatgtgcagatcggccgaggcgctgattggaacgcggccggg
cactga
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