Microbacterium sp. RG1: EHF32_08680
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Entry
EHF32_08680 CDS
T10164
Name
(GenBank) ExeM/NucH family extracellular endonuclease
KO
K07004
uncharacterized protein
Organism
mice Microbacterium sp. RG1
Brite
KEGG Orthology (KO) [BR:
mice00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
EHF32_08680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
LTD
Exo_endo_phos
Metallophos
DNA_pol_B_N
Trypan_PARP
TSKS
Motif
Other DBs
NCBI-ProteinID:
QCQ16785
LinkDB
All DBs
Position
complement(1797940..1802889)
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AA seq
1649 aa
AA seq
DB search
MSPSQPRRPFAALAFGIGTAVVAGMFVPAVAVAAEPADVIINEVYLKGGSANAPFNKKFV
ELYNAGETAQSLDGWSLQYRSADGTGGPSVTEPLSGVIEPDDYYLIAWNGNGAVGAALPV
TPDLSFDKGFNASGTTGTLYLADTTQALTLPTGSVVEQQHVVDLLGYGASKTFETSVVPV
TGGNAVPNSLARTNFVDTDDNAADFSHPAQITPQASAKSGTDPDPGTDPDPDPDPGTDPD
PGTDPGTPAIRTIAEIQGTGDATPLLGQTVTTRGIVTGAYAEGGFNGFTIQTPGTGGAVD
ASHTASDALFVYGGTGQAGAALAAKAPMGAYVEVTGVAGEYSSVAGDPQTLTQLNVSAGS
VTAIDEQVAAVTPVPLAWPIAPADREKFESMLVAPQGRFTVSNTYTTNQYAEIGLASGEK
PLITPTDVARVGTQEYTDAVADNAARGVVLDDGASINFLGGSTNKAIPLPYLTDVDVTVG
GAVSFTQPVILDYRNGAWKVQPTTQLKAGDPLPVTIGSARAASAPDAVGGDISIASFNVL
NYFTTTAADVGCTSVYTDRDGNPITANQCPNNGPRGAATDVSLKRQQDKIVDAINALGTE
VVSLEEIENSAAFGENRDAALSTLVDALNADLGKDEWAYVPSPTQVPSGEDVIRTAFIYK
ADAVSPVGDSVIDLDAAFVNARRPLAQAFAPKGETDAAFLAIVNHFKSKGDNRDNPATGD
NANGPQGAYNGDRVRQAQALVDFADERKAAAGTDRVFLLGDFNSYTQEDPMQVFYAAGYT
DLGSRTGKHTYSFDGASGSLDHVLASPAAAKMVTGVDVWNINAGESIALEYSRYNYNATN
FYEVSPYRSSDHDPVVVGITWNPTVALNLLNINDFHGRIDDNTVKFAATIEQLRAQAGEE
NTLFLSSGDNIGASLFASSVADDKPTLDVLNTLELSASAVGNHEFDKGLEDLEGRVKDQA
AFPYLGANVYEKGTTTPALQEYATFEVQGLTVAVIGAVTEETPTLVSPGGVATVDFGDPV
EAVNRVAAQLTDGDPSNGEADVIIAEYHEGAAAGVTEKSTLEEELKDGKAFADIVTNTSA
AVDAIFTGHTHKLYAWDAPIPGTDRTRPVVQTGNYGENIGQVRLTLDAETGDVLAHTQRN
VARIAIENDGNTSNDAAQSAALNAELAAQYPRVAEVKEIVDAALAYAAERGSVPVGSVTA
DITTAFTGGAYTDGVYAGGTRDNRAAQSTLGNLVADSLVATLSDPLRGGAEIGVVNPGGL
RAELLRGDDGVITFAEANAVLPFVNNLWTTTLTGEQFTQVLEEQWQTNADGTIPSRPYLA
LGLSKNVTYTYDADAAQGSHITGVWIDGEPIDPKGSYRIGSFNFLLQGGDNFRTFAEGTD
TRDSGLIDRDAWISYLTANSPVSPSYATRSAEVTGLLASVAPGAQVSFQVGGLNLTSLGS
PETTSLLVSIEGSTAVIDPVTVTGGTATVTFTVPADAPADSTIILQAPQTGTELRLPLKV
TSATPPTTTPQPVDPSQLVPTLQDLIKVVAGELRAGATITIHVGTQYAGDWVTVWLYSTP
RQLGGWHQVDAAGNVTVTLPADLTGDHRLVVLDANGQVIGWQAVSIAPRPGSLAATGAET
QWIAGALLAASLLLALGIVGRAVPVRRRS
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgtccccctcccagccgaggcgcccctttgcagcgctcgccttcgggatcggaaccgcg
gtcgtcgcgggcatgttcgtgcccgccgtcgccgtcgccgccgagcccgccgatgtcatc
atcaacgaggtctacctcaagggcggaagcgccaacgctccgttcaacaagaagttcgtc
gagctgtacaacgccggcgagaccgcgcagagcctggacggctggtcgctccaataccgt
tccgccgatggaaccgggggcccttcggtcaccgagccgctgagcggcgtcatcgagccc
gatgactactacctgatcgcgtggaacggcaacggcgccgtgggcgccgcgctccccgtc
accccggacctgtcgttcgacaagggcttcaacgcctccggcacgacgggcacgctctac
ctcgcggacaccacgcaggcgctcacgcttcccaccggatccgtcgtcgagcagcagcac
gtcgtcgatctcctcggttacggcgcatccaagacgttcgagacgagcgttgtcccggtc
accggcgggaacgccgtcccgaactcgctcgcgcgaacgaacttcgtcgatacggacgac
aacgcggccgacttcagccaccccgcgcagatcacgccgcaggcatccgcgaagtcaggc
accgatcctgatcccggcaccgaccccgaccccgaccccgaccccggcacggacccggat
cccggcaccgaccccggtactcccgcgatccggacgatcgccgagatccagggcaccggc
gacgcgacgccgctgctgggccagacggtcaccacgcgcggcatcgtcaccggcgcctac
gcggagggcggcttcaacgggttcaccatccagactcccggtacaggtggcgcggtggat
gcttctcacaccgcatccgacgccctcttcgtctacggaggaaccgggcaggcgggagcg
gccctcgccgcgaaggccccgatgggcgcctacgtcgaggtgaccggcgtggccggcgag
tactcgagcgtcgcgggtgacccccagacactcacccagctcaacgtctcggccggctcg
gtcaccgcgatcgacgagcaggtcgcggccgtgacgccggtgcccctcgcctggccgatc
gcgccggcggaccgtgagaagttcgagagcatgctcgtggcgccccagggccgattcacg
gtgagcaacacgtacacgacgaaccagtacgccgagatcgggctcgcgtccggcgagaag
ccgctcatcacgcccacggatgtcgcgcgtgtgggcacccaggagtacacggacgccgtc
gccgacaacgccgcgcgcggtgtcgtgctcgacgacggtgcgtcgatcaacttcctgggt
ggttcgaccaacaaggcgatcccgctgccgtacctgaccgacgtcgatgtcacggtgggt
ggcgcagtgtcgttcactcagccggtgatcctggactaccgcaacggtgcctggaaggtt
cagccgaccacgcagctcaaggccggcgacccgctgcccgtcaccatcggatcggcgcgc
gccgcatccgcacccgacgcggtcggcggcgacatctcgatcgccagcttcaacgtgctg
aactacttcacgaccaccgctgcggacgtgggctgcacgtcggtctacaccgaccgcgac
ggcaaccccatcacggcgaaccagtgcccgaacaacggcccgcgcggtgcggccactgat
gtgagcctgaagcgtcaacaggacaagatcgtcgacgcgatcaacgcgctcggcaccgag
gtcgtctcgctcgaggagatcgagaactcggcggcgttcggcgagaaccgcgatgcggcc
ctgtcgactctcgtcgacgcgctgaacgccgacctcggcaaggacgagtgggcctatgtg
ccctcgcccacccaggtgccctcaggtgaggacgtcatccgcaccgcgttcatctacaag
gccgacgcagtatcgccggtcggcgactccgtcatcgatctcgatgccgccttcgtcaac
gcgcgacgcccgctcgctcaggcgttcgcgcccaagggtgagacggatgccgccttcctg
gcgatcgtgaaccacttcaagtcgaagggggacaaccgcgacaacccggccacgggtgac
aatgccaacgggccacagggcgcctacaacggcgaccgggtgcgccaggcgcaggcgctc
gtggacttcgccgacgagcggaaggctgctgccgggaccgaccgcgtgttcctgctcgga
gacttcaactcgtacacgcaggaagaccccatgcaggtcttctacgcggccgggtacacc
gacctcggatcgcgcacaggcaagcacacgtactccttcgacggtgcgagcggctcgctc
gaccacgtgttggcctcgcccgccgcggccaagatggtcaccggcgtcgatgtgtggaac
atcaacgcgggggagtcgatcgcgctcgagtacagccggtacaactacaacgcgacgaac
ttctacgaggtctcgccctaccgctccagcgaccacgacccggtcgtggtgggcatcacg
tggaatccgaccgtcgcactcaacctgctgaacatcaacgacttccacggtcgaatcgac
gacaacacggtgaagttcgctgccaccatcgagcagctgcgggctcaagccggtgaagag
aacaccctgttcctctcgagcggtgacaacatcggcgcctccctgttcgcgtcgtcggtg
gccgatgacaagccgacactggacgtcctgaacacgttggagctgagcgcctcggcggtc
ggcaaccacgagttcgacaagggcctcgaggacctcgaaggacgtgtcaaggatcaggcg
gcgttcccgtacctcggcgcgaacgtctacgagaagggaaccaccacgccggcgctgcag
gagtacgcgacgttcgaggtgcaggggctgacggtcgccgtgatcggcgccgtgacggag
gagactcccacgctcgtgtcgcccggcggggtggccacggtcgacttcggtgatcccgtc
gaggccgtgaaccgagtggcggcccagctgaccgacggcgacccgtccaacggtgaggcg
gacgtcatcatcgccgagtaccacgagggtgctgcggccggtgtgacggagaagtcgacg
ctggaggaggagttgaaggacggcaaggcgttcgccgacatcgtcaccaacacctcggcc
gccgtcgacgcgatcttcaccggtcacacccacaagctgtacgcgtgggatgcccccatc
ccgggcaccgaccgcacgcggcccgtggtgcagaccggcaactacggcgagaacatcggc
caggtgcgtctgacactggatgcggaaacgggcgacgtgctcgcgcacacgcagcggaac
gtggcgcgcatcgcgatcgagaacgacggcaacacctccaacgacgcagcgcagagcgcg
gccttgaacgccgaactggcggcacagtatccgcgggtcgcggaggtcaaggagatcgtc
gacgcggcgctggcctacgccgccgagaggggcagcgtcccggtcggaagcgtcacggca
gacatcacgacggccttcacgggcggtgcgtacacggacggcgtctacgccggcggcacg
cgtgacaaccgcgccgcgcagtcgacgctcggcaacctcgtcgccgactcgctcgtcgcg
acgctctccgacccgcttcgcggtggcgcagagatcggcgtggtgaatcccggtggtctt
cgtgccgagctgctgcgcggcgacgacggggtcatcacgttcgccgaggcgaacgcggtc
ctgccgttcgtgaacaacctctggacgacgaccctcacgggggagcagttcacgcaggtg
ctcgaggagcagtggcagacgaacgccgacgggacgatcccgtcgcggccctacctcgct
ctcggtctctcgaagaacgtgacctacacctacgacgcggacgcggcgcagggatcccac
atcacgggcgtctggatcgacggcgagccgatcgatccgaagggttcgtaccggatcggc
tcgttcaacttcctcctgcagggcggcgacaacttccgcacctttgcggagggaaccgac
acgcgcgactccggtctcatcgaccgggatgcgtggatctcgtatctcacggcgaacagc
ccggtctccccgagctacgcgacgcgcagcgccgaggtgacggggctcctggcatccgtc
gcgcccggtgcgcaggtctcgttccaggtgggcgggctgaacctcacctcgctcggaagc
ccggagacgacctctctgctggtgagcatcgagggcagcacggccgtcatcgatccggtc
accgtcacgggaggaaccgcgacggtcaccttcacggtgcccgccgacgctccggcggac
agtacgatcatcctccaggcgccgcagacgggcacggaactccgcctcccgctgaaggtg
acctccgccaccccgccgaccacgacgccgcagcccgtggacccgagccagctcgtgccc
acgctgcaggacctcatcaaggtcgtcgcgggcgagctgcgcgccggagccacgatcacg
atccacgtcggcacgcagtacgcgggcgactgggtgacggtctggctgtactccaccccg
cgtcagctcggtggatggcaccaggtggatgcggcgggcaacgtcacggtcaccctgccc
gccgatctcacgggcgatcaccggctcgtggtgctcgacgcgaacggtcaggtcatcggc
tggcaggcggtctccatcgctcccaggccgggatcgctggccgccaccggtgccgagacg
cagtggatcgcgggtgcactgctcgccgcatcactgctgctcgcgctcggtatcgtcgga
cgcgcggtgccggtgcgtcgacgcagctga
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