Microbacterium sp. RG1: EHF32_09935
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Entry
EHF32_09935 CDS
T10164
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mice Microbacterium sp. RG1
Brite
KEGG Orthology (KO) [BR:
mice00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mice03016
]
EHF32_09935 (truA)
Enzymes [BR:
mice01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
EHF32_09935 (truA)
Transfer RNA biogenesis [BR:
mice03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EHF32_09935 (truA)
Prokaryotic type
EHF32_09935 (truA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
YutD-like
Motif
Other DBs
NCBI-ProteinID:
QCQ17011
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All DBs
Position
complement(2052598..2053437)
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AA seq
279 aa
AA seq
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MRIRLDIAYDGTHFRGWARQPGLRTVQGTLEEALARIIAGAPQLTVAGRTDAGVHASGQV
AHLDLDDAQRTRLAASRRSESDPVAALARRIRGVLSSYADVTVHRTALAPDGFDARFSAV
WRRYAYRIADDVTGYDPLRREFTTTVRAALDVAAMDEAAQSLRGLHDFAAYCKPREEATT
IRTLLEFDWRRDDEGAIVANVKADAFCHSMVRALVGACVAVGQGRLAVEDVVRLREQATR
TSEFAVLAARGLVLTEVGYPEPELMAARAEQTRARRDQE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gtgcggatccgactcgacatcgcttatgacggcacgcacttccgcggctgggcgcggcag
ccgggcctgcgcaccgttcaaggaacgctcgaggaggccttggcgcggatcatcgccggt
gcgccgcagctgacggtcgccgggcgcacggatgcgggcgtgcacgcgagcggccaggtc
gcccatctcgacctcgacgacgcgcagcggacgcggctggcggcctcgcgccggtcggag
tccgatcccgttgcggctctggcgcgacgcatccgcggcgttctgagctcgtacgcggat
gtgacggtgcaccgcaccgcgctcgcgcccgacggcttcgacgcgcgattctcggctgtc
tggcgccggtacgcctaccggatcgccgacgacgtcaccggttacgatccgctgcgacgg
gagttcaccaccaccgtgcgtgccgcgctggatgtcgcagcgatggatgaggccgcgcag
tcgctgcggggcctgcacgacttcgctgcctactgcaagccgcgcgaggaggcgacgacc
atccgtacgctgctcgagttcgactggcgccgcgacgacgagggagcgatcgtggcgaac
gtgaaagcggacgcgttctgccattcgatggtgcgcgcgctcgtcggggcgtgtgtcgcg
gtcggacaagggcgcctcgcggtcgaggacgtcgtgcggctgcgcgagcaggcgacgcgg
acgagtgagttcgccgtcctcgccgcgcgcgggctggtgctgacggaagtgggctatccg
gagccggagctgatggcggcgcgggccgagcagacgcgggcgcgtcgcgatcaggaatga
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