Microbacterium sp. RG1: EHF32_10205
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Entry
EHF32_10205 CDS
T10164
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mice Microbacterium sp. RG1
Pathway
mice03020
RNA polymerase
Brite
Enzymes [BR:
mice01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EHF32_10205 (rpoC)
Transcription machinery [BR:
mice03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EHF32_10205 (rpoC)
DNA repair and recombination proteins [BR:
mice03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EHF32_10205 (rpoC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QCQ17064
UniProt:
A0A4P8KSQ1
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All DBs
Position
complement(2094886..2098761)
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AA seq
1291 aa
AA seq
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MLESTTFDQIRIGLATADDIRRWSFGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVISVDEEGRHRDLPTHENNLRLEIKNLGDRRDARVAARLAALEEE
LATLEAEDAKADAKKKAKDAAEKEMALIRKRGDEQIAKLERVWEEFRSLEVGALKPEDEI
FNELVDRFGQYFEAHMGAESIKRRLESFDLAAEADSLRLQISEGKGQRKIRAIKRLKVVN
SFLSTGMSPASMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERTR
PEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARILMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVKEGAVGEGR
VFGSVGEAILAKDEGTLDLQAKVRIRVPGLTFLEGEAPEGYERHGLVDASLGQAIFNDTL
PKGYPFVREQADKGKLSQIVNKLAEEYPKVEVAASLDRIKDAGFYWATRSGVTVALSDVL
TPPNKADIIAGYEKQAAKVQSQYEKGLTTDAERRQELIKIWTAATDEVQAAMKSHFPADN
TINRMVSSGARGNWLQIRNIAGMRGLVNNPKGEIIARPIISSYREGLSVAEYFIATHGAR
KGLADTALRTADSGYLTRRLVDVSQDVIIREEDCATTKGLELPIAAAGADGVLIKDANVE
NSVFARTLAADVVSPSGEVLAEAGSDVGDVLINRLVEGGVTSIKVRSVLTCDSAVGVCAK
CYGRSLATGKVVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASAEDITQGLPRVQELF
EARTPKGSSPIAEADGRITIEETEKQKKVILTPDNGDEPHVYPVLKRATLLVEDGQRVEV
GQPLQVGTLDPKEIMRVMGAREVQKYLVGGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTV
VDHGDTTLLPGEMVDSRRFIDINRASVAEGKRPASGRPELMGITKASLATESWLSAASFQ
ETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLSKYRNVTVEATEEAKSERYPNRI
FASDGAYSDSDLSYVDFDSFSTDDFTPGTYN
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgaatccaccactttcgaccagatccgcatcgggctggccacggccgacgacatc
cgtcgttggtccttcggcgaggtcaagaagcccgagacgatcaactaccgcaccctgaag
cccgagaaggacggtctgttcggcgagcagatcttcggaccctcgcgcgactgggagtgc
gcctgcggcaagtacaagcgcgtccgcttcaagggcatcgtctgcgagcgctgcggcgtg
gaggtcaccaagagctccgtccgccgcgagcgcatgggccacatcgagctcgccgcgccc
gtcacccacatctggtacttcaagggcgtcccctcgcgcttgggctacctgctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgccgcctacatggtgatctccgtcgat
gaggagggccgccaccgcgacctccccacccacgagaacaacctgcgtctcgagatcaag
aacctcggcgaccgccgcgacgcccgtgtggctgctcgcctggcggccctcgaggaggag
ctcgcgactctcgaggccgaggacgccaaggccgacgccaagaagaaggccaaggatgcg
gccgagaaggagatggctctcatccgcaagcgcggtgacgagcagatcgccaagctcgag
cgcgtctgggaggagttccgctccctcgaggtcggcgccctgaagcccgaggacgagatc
ttcaacgagctcgtcgaccgcttcggtcagtacttcgaggcgcacatgggcgcggagtcg
atcaagcgccgtctggagagcttcgacctggccgccgaggccgacagcctgcgtctgcag
atctccgagggcaagggccagcgcaagatccgtgcgatcaagcgcctcaaggtcgtcaac
tcgttcctgtcgaccggtatgtcgccggcatcgatggttctggacgtcgtcccggtcatc
ccgccggagctgcgtccgatggtccagctcgacggcggccgcttcgccaccagcgacctg
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgtcttcgccgtctgatcgacctc
ggtgctcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggtcgtcgtggtcgcccggtcacgggcaccggcaaccgcgccctcaag
tccctcagcgacatgctgaagggtaagcagggtcggttccgtcagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcatcgtcggcccgcagctcaagctgcaccag
tgtggtctgcccaagcagatggccctggagctgttcaagccgttcgtgatcaagcgcctg
atcgacctcggtcactcgcagaacatcaaggccgcgaagcgcgccgtcgagcgtacgcgt
cccgaggtctgggacgtgctcgaggagatcatccgcgagcgcccggtgctcctcaaccgt
gctcccacgctgcaccgtctgggcatccaggcgttcgagccgcagctcgtcgagggtaag
gccatccagctccacccgctcgtgtgtgccgccttcaacgcggacttcgacggtgaccag
atggctgtgcacctgccgctgtcggtcgaggcgcaggccgaggcccgcatcctgatgctc
gcctcgaacaacatcctgaagccgtcggacggccgtccggtcaccctgccctcgcaggac
atgatcatcggtctccaccacctgaccacggtcaaggagggtgccgtcggtgagggccgc
gtgttcggttcggtcggtgaggcgatcctggccaaggacgagggcaccctcgacctgcag
gccaaggtccgcatccgcgttcccggtctgaccttcctcgagggcgaagcccccgagggc
tacgagcgccacggtctcgtcgacgcctcgctcggtcaggcgatcttcaacgacaccctt
cccaagggctacccgttcgtgcgcgaacaggccgacaagggcaagctgtcgcagatcgtc
aacaagctggccgaggagtaccccaaggtcgaggtcgccgcatccctggaccgcatcaag
gacgccggcttctactgggccacgcgttcgggtgtgaccgttgcgctcagcgacgtgctg
accccgccgaacaaggcggacatcatcgcgggctacgagaagcaggccgcgaaggtccag
tcccagtacgagaagggcctcacgaccgacgccgagcgtcgtcaggagctcatcaagatc
tggacggctgcgaccgacgaggtccaggcggccatgaagagccacttcccggccgacaac
accatcaaccggatggtgagctcgggcgcccgtggtaactggctgcagatccgcaatatc
gcgggtatgcgtggtctggtgaacaacccgaagggtgagatcatcgcccgcccgatcatc
tcctcgtaccgcgaggggctgagcgtggccgagtacttcatcgcgacccacggtgcccgt
aagggtctcgccgacaccgctctgcgtaccgccgactcgggttacctgacgcgtcgactc
gtcgacgtgtcgcaggacgtcatcatccgcgaggaggactgcgccacgaccaagggtctg
gagctgcccatcgccgccgcgggtgccgacggggtgctcatcaaggacgccaacgtcgag
aactcggtgttcgcccgtacgctcgccgcggacgtggtcagcccgagcggtgaggttctc
gccgaggccggttcggatgtgggcgacgtgctcatcaaccgcctggtcgagggcggcgtc
acctccatcaaggtgcgctcggtcctgacctgcgactccgccgtgggtgtgtgcgcgaag
tgctacggccgctcgctcgcgaccggcaaggtcgtcgacatcggcgaggccgtcggcatc
atcgcggcccagtcgatcggtgagcccggtacccagctgacgatgcgtaccttccacacc
ggtggttcggcatccgctgaggacatcacgcagggtctgccccgcgtgcaggagctcttc
gaggcgcgtacccccaagggttcctcgcccatcgcggaggccgacggtcgcatcacgatc
gaagagaccgagaagcagaagaaggtcatcctcacgccggacaacggtgacgagccgcac
gtctaccccgtgctcaagcgcgccaccctgctcgtcgaggacggccagcgcgtcgaggtc
ggtcagcccctccaggtcggcacgctcgacccgaaggagatcatgcgcgtcatgggcgcc
cgcgaggtgcagaagtacctcgtcggcggtgtccagggcgtgtaccggtcgcagggtgtc
ccgatccacgacaagcacatcgaggtcatcgtccgtcagatgctgcgcaaggtcaccgtg
gtcgaccacggcgacaccacgctgctgcccggcgagatggtcgactcgcgtcgcttcatc
gacatcaaccgtgcatccgtcgccgagggcaagcgccccgcgtcgggccgcccggagctg
atgggtatcacgaaggcctcgctcgcgaccgagtcgtggctgtcggccgcttccttccag
gagacaacccgcgttctgacgcaggccgcgatggagggcaagagcgacccgctcgtgggc
ctgaaggagaacgtgatcatcggaaagctgatccccgcggggaccggcctgtcgaagtac
cgcaatgtcacggtcgaggcgaccgaagaggccaagagcgagcggtaccccaaccgcatc
ttcgcctcggacggtgcgtacagcgactccgacctgagctacgtcgacttcgacagcttc
tcgacggacgacttcacgcccgggacctataactga
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