Microbacterium sp. RG1: EHF32_11555
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Entry
EHF32_11555 CDS
T10164
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mice Microbacterium sp. RG1
Brite
KEGG Orthology (KO) [BR:
mice00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mice03032
]
EHF32_11555
03400 DNA repair and recombination proteins [BR:
mice03400
]
EHF32_11555
Enzymes [BR:
mice01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EHF32_11555
DNA replication proteins [BR:
mice03032
]
Prokaryotic type
DNA Topoisomerases
EHF32_11555
DNA repair and recombination proteins [BR:
mice03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EHF32_11555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QCQ17310
UniProt:
A0A4P8KRI5
LinkDB
All DBs
Position
complement(2384478..2385440)
Genome browser
AA seq
320 aa
AA seq
DB search
MARLARVDPGSDAGISRTRSGTGFSYTRPDGSKVTAAERARIEALVIPPAWQEVWICAKD
NGHIQAVGTDDAGRRQYLYHPDWSAKRDKGKYARALALAESLPRARGRVTAALRRADDSR
EAVLAAAFRMLDAGAIRIGSTKYLRRGGGRGLTTLQRRDVRVEAGVIELDFPAKSGVRAR
IRIEDEDLAVVLEQLTAGRPRSPLLAYRRGRRRVALTPGEVNAYIRVLTGGDFTAKDFRT
LRGTVTAAESLARLGHVESKKARKLAERDAVKATAAVLCNTPSVARSSYIDPRVWRAYAK
GRLLESGVSPETAIRRLVEG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgactggcccgggtcgatcccggatcggatgcggggatctcccgcacgcgcagc
ggcacggggttcagctacacgcggcccgacggctcgaaggtcacggcagcggagcgtgcc
cgcatcgaggccctcgtcatcccgccggcgtggcaggaggtctggatctgtgcgaaggac
aacggccacatccaggcggtcggcaccgacgacgccggtcggaggcagtacctgtaccac
cccgactggtcggccaagcgggacaagggcaagtacgcgcgtgctctcgccctcgcggag
tcgctgccgcgcgcccgcggccgggtgacggcggcactgagacgcgcggacgactcgcgc
gaggccgtgctcgccgccgcgttccggatgctggatgcgggagccatccggatcggctcc
acgaagtacctgcgccgcggcggcgggcggggcctcacgaccctgcagcggcgcgacgtc
cgcgtcgaggccggcgtgatcgaactcgacttccccgcgaagagcggggtgcgcgcccgc
atccgcatcgaggacgaggacctggccgtcgtcctcgagcagctgacggcggggcgcccg
cgttcgccgctgctcgcctaccggcgcggtcgacggcgcgtggctctgacgcccggcgag
gtgaacgcctacatccgtgtgctcaccggcggagacttcacggcgaaggacttccgcacg
ctgcggggtacggtcaccgcggcggagagcctcgcgcgtctcgggcacgtggagtcgaag
aaggcgcgcaagctggcggaacgcgacgccgtgaaggcgacggccgcggtgctgtgcaac
acgccgtccgtcgcgcggagcagctacatcgacccgcgggtgtggcgggcgtacgcgaag
gggcggctgctggagtcgggcgtctcgcccgagaccgcgatccggcgtctcgtcgaaggc
tga
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