KEGG   Microbacterium sp. RG1: EHF32_13065
Entry
EHF32_13065       CDS       T10164                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
mice  Microbacterium sp. RG1
Brite
KEGG Orthology (KO) [BR:mice00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mice03032]
    EHF32_13065
   03036 Chromosome and associated proteins [BR:mice03036]
    EHF32_13065
   03400 DNA repair and recombination proteins [BR:mice03400]
    EHF32_13065
DNA replication proteins [BR:mice03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    EHF32_13065
Chromosome and associated proteins [BR:mice03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    EHF32_13065
DNA repair and recombination proteins [BR:mice03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      EHF32_13065
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF937 HU-CCDC81_euk_2 HTH_26 SSB LacI PSF3_N
Other DBs
NCBI-ProteinID: QCQ17580
UniProt: A0A4P8KS82
LinkDB
Position
2678332..2678619
AA seq 95 aa
MADKSITKTELVASIASATGQSQSTVSSVLDSLFSTVSEAVAKGTKVSIPGWIAFEQVET
SARTGRNPQTGAEIAIPAGKRVKVTAGSKLKAAVK
NT seq 288 nt   +upstreamnt  +downstreamnt
atggccgacaagtccatcaccaagaccgagctcgtcgcgagcatcgccagcgccacggga
cagagccagtccaccgtgtcgagcgtgctcgactccctcttctccacggtctccgaggcc
gtcgccaagggcaccaaggtctccatccccggttggatcgcgttcgagcaggtcgagacc
tccgctcgcaccggccgcaacccgcagaccggcgccgagatcgccatccccgccggcaag
cgcgtcaaggtgaccgccggttcgaagctcaaggccgccgtcaagtaa

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