Micromonospora sp. FIMYZ51: QQG74_11190
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Entry
QQG74_11190 CDS
T10361
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
micf Micromonospora sp. FIMYZ51
Brite
KEGG Orthology (KO) [BR:
micf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micf03019
]
QQG74_11190 (hrpB)
Enzymes [BR:
micf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QQG74_11190 (hrpB)
Messenger RNA biogenesis [BR:
micf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QQG74_11190 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_30
ResIII
RoxA-like_Cyt-c
ParA
AAA_19
nSTAND3
AAA
Motif
Other DBs
NCBI-ProteinID:
WZH97815
LinkDB
All DBs
Position
complement(2301903..2304428)
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AA seq
841 aa
AA seq
DB search
MLSDVPLDLPVRPVLPAVLSALRSAGAAVLVAPPGTGKTTLAPLAVADAVDGRVIVAQPR
RVAARAAARRMAALLGGRVGDQVGYAVRGERRTGSRTRVEVVTTGLLVRRLHHDPELAGV
GAVLLDEVHERQLDADLALAFTVEARAALRPDLRLLAMSATPQADRFAALLGGTTPAPII
HATAALHPVTRIWAPPARPVPPPGAGPVDRGLLDHVAATVRRALRERTGDLLVFLPGVGE
IATVAGRLADLRDDGVDVLRLHGRQDGAEQDAALRPGARRRVVLATAVAESSLTVPGVRT
VVDAGLSRVARLDLARGLGALVTVPVSRAAATQRAGRAGREAPGHVYRCWSEAGHERLPA
QPEPEIAAADLTGFALELAAWGAPDGAGLALPDPPPAAAMTVARQTLRTLGALDADGRIT
ARGRAIAAAGAPPRLARALLDGARRVGAERAAEVVALLADESVARPGDDIAAAWRRLRAG
TDPAATARWRAEVRRLRAALPAAGEPDPGTARELPLPDDLAAGLLVGLAYPERLARSRRP
GGSAYLMSGGTAAELAAGSALAGADWLAVAVADRSPGAPTARIRLAAVLDEATAREVGAP
SLRTVREVAWSGTDVLAREVTRLGAIELVERPLSRPAPAEVAAALLTGLRSVGLDLLTWT
PAARALRERLAFCRQALGADWPDVSDAALLAGAPDWLGPELATARRRADLARIDVAGALR
RLLPWSLAGRLDELAPERITVPSGSRIRVDYADPAAPVLAVKLQETFGWAVAPRIAGGRV
PVLLHLLSPAGRPVAVTADLGSFWRTGYRQVRAELRGRYPRHPWPEDPTTAPPTRSVGRR
R
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
gtgctctcggacgtgcccctcgacctgccggtccggccggtgctgccggcggtgctgtcg
gcactccgctcggccggcgccgccgtcctggtcgcaccgccgggcaccggcaagaccacc
ctcgcgccgctcgcggtggccgacgcggtcgacgggcgggtgatcgtcgcccagccccgc
cgggtggccgcccgcgccgcggcccgacggatggcggccctgctcggcgggcgggtcggc
gaccaggtgggctacgcggtacgcggtgagcgccggaccggcagccgcacccgcgtcgag
gtggtcaccaccggcctgctggtccgtcggctgcaccacgatcccgaactggccggcgtc
ggcgcggtgctgctcgacgaggtccacgagcggcaactcgacgccgacctcgcgctcgcc
ttcacggtggaggcccgcgccgcgctgcggccggacctccggctgctggcgatgtccgcg
accccgcaggccgaccgcttcgccgccctgctcggcggcaccacgcccgcgccgatcatc
cacgccacggcggccctgcatccggtgacccggatctgggcgccgccggcccggccggtg
ccgccgcccggcgccggcccggtggaccggggcctgctcgaccacgtggcggccacggtc
cggcgggcgctgcgcgaacgcaccggagacctgctggtcttcctgcccggggtcggcgag
atcgccaccgtcgccggccggctggccgacctgcgcgacgacggcgtcgacgtgctgcgg
ttgcacggccggcaggacggcgccgaacaggatgccgccctgcgaccgggcgcacggcga
cgggtggtgctggccaccgcggtggcggagagcagcctgaccgtgccgggcgtgcggacg
gtggtggatgccgggctgtcccgggtcgcccggctggacctggcccgcgggctgggcgcg
ctggtcaccgtgccggtgtcccgggcggcagccacccagcgggccggccgggccgggcgg
gaggcacccggccacgtctaccgctgctggtcggaggccgggcacgagcggctgccggcc
cagccggagccggagatcgccgccgccgacctcaccggcttcgccctggagctggccgcc
tggggcgcacccgacggtgccgggctcgccctgcccgatccgccgccggcagcggccatg
actgtggcccggcagacgttgcgcaccctgggcgccctcgacgcggacggccggatcacc
gcccggggcagggcgatcgccgccgccggggcacctccccggctggcccgggcgctgctc
gacggcgcccggcgggtgggtgcggaacgggccgccgaggtggtggcgctgctcgccgac
gagtcagtggcccgccccggcgacgacatcgccgccgcctggcgccggctacgcgccggc
accgatcccgccgcgaccgcccgctggcgggccgaggtacgccggctgcgggccgcccta
cccgccgccggggagcccgacccggggacggcgagggaactgccgctgcccgatgacctc
gccgccgggctgctggtcgggctggcgtacccggaacggctggcccggtcccgacggccg
ggcggctcggcgtacctgatgagcggtgggaccgcggcggagctggcggcgggctcggcg
ctggccggtgccgactggctggccgtggcggtggcggaccgctcccccggcgcaccgacc
gcccggatccggctcgccgccgtgctcgacgaggcgaccgcccgcgaggtcggcgcgccg
tcgctgcggaccgtccgggaggtggcctggtccggtaccgacgtgctggcccgggaggtg
acccgactgggcgcgatcgagctggtcgagcgcccgctgtcgcggcccgcgccggccgag
gtcgccgccgccctgctgaccggcctgcgtagcgtcggtctcgacctgctgacctggacc
ccggcggcgcgggcgctgcgcgaacggctggcgttctgccggcaggcgctcggcgcggac
tggccggacgtttccgacgcggcgctgcttgccggtgcgcccgactggctcggcccggag
ctggccaccgcgcgccgccgcgcggacctggcccggatcgacgtggccggcgcgctgcgc
cgcctgctgccctggtcacttgcggggcggctggacgagctggccccggaacggatcacc
gtgcccagcggctcccggatccgggtggactacgccgatccggccgcgccggtgctcgcg
gtcaaactccaggagaccttcggttgggcggtggcgccccggatcgccggtggtcgggtg
ccggtgctgctgcacctgctctctccggcggggcgacccgtggcggtcaccgccgacctc
gggtcgttctggcgcaccggctaccggcaggtccgggccgaactacgtggccgctatccg
cgccacccgtggccggaggacccgaccacggcaccgccgacccggtcggtcggccggcgg
cgctga
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