Micromonospora sp. FIMYZ51: QQG74_18820
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Entry
QQG74_18820 CDS
T10361
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
micf Micromonospora sp. FIMYZ51
Pathway
micf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QQG74_18820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micf03019
]
QQG74_18820
03009 Ribosome biogenesis [BR:
micf03009
]
QQG74_18820
Enzymes [BR:
micf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QQG74_18820
Messenger RNA biogenesis [BR:
micf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QQG74_18820
Ribosome biogenesis [BR:
micf03009
]
Prokaryotic type
rRNA helicases
QQG74_18820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WSD
Motif
Other DBs
NCBI-ProteinID:
WZH93541
LinkDB
All DBs
Position
4124738..4126435
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AA seq
565 aa
AA seq
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MSSTPVPPDPNTDPSLFADLGLRPELLAALAALGYEEPTPIQREAIPPLLAGRDLLGQAA
TGTGKTAAFALPVLQRMPEDRPDGNPIALVLVPTRELAVQVSEAFHRYGKDLGTRVLPIY
GGQPIGRQLRALDAGVDVVIATPGRALDHIARGTLRLGAVGTVVLDEADEMLDMGFAEDI
EAILEHAPQQRQTVLFSATMPARIDGMARAHLTDPVRILIAREQPVAGEAPRVRQSAYLV
ARAHKPAALGRVLDVESPTAAIVFCRSREEVDRLTETMNGRGYRAEALHGGMSQEQRDRV
MGRLRAGTADLLVATDVAARGLDVEQLSHVVNYDVPSAPESYVHRIGRVGRAGREGVAIT
LAEPREHRMLKTIERVTGQRITIDKIPTVADLRTRRLELTQAALRESLLEDDLEPFRVIV
ETLSDEFDLMEVALAAVKLAHEASLPGSDDAEEEIPQVAVRPSRPVRPEYEGRGERRSGR
PRAGGMTQVFVGLGRRAGVRPQDLVGAITGETNVSGREIGSIEIADRFSLVEVPNALAEE
VIAGLRGSTIKGRRATVRRDRDTRT
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagttccacgcccgtacccccggaccccaacaccgacccgtccctcttcgcggacctc
ggcctgcggcccgagctgctcgccgcgctcgccgcgctcggctacgaggagccgacgccg
atccagcgggaagccatcccgccactgctggccggccgggacctgctcgggcaggcggcg
acgggcacgggcaaaacggccgcgttcgcgctgccggtgctgcaacggatgccggaggat
cggccggacggcaaccccatcgcgctggtgctggtgccgacgcgcgagctggcggtgcag
gtctccgaggcgttccaccgctacggcaaggacctgggcacccgggtactgccgatctac
ggcgggcagccgatcggccggcagctgcgcgccctggacgccggggtcgacgtggtgatc
gccaccccgggccgggcactcgaccacatcgcccggggcacgctgcgtctgggcgccgtc
ggcacggtggtgctggacgaggccgacgagatgctcgacatgggcttcgccgaggacatc
gaggcgatcctggaacacgccccgcaacagcggcagacggtgctcttctcggcgaccatg
ccggcccgcatcgacgggatggcccgggcgcacctgaccgacccggtacgcatcctgatc
gcccgcgagcaacccgtggccggcgaggctccccgggtgcggcagagcgcgtacctggtg
gcccgggcgcacaagccggccgcgctgggccgggtgttggacgtggagtcgccgaccgcg
gcgatcgtgttctgccgcagccgggaggaggtcgaccggctcaccgagacgatgaacggg
cgcggctaccgggccgaggcgctgcacggcgggatgagtcaggagcagcgggaccgggtg
atgggccggctgcgcgccggcaccgccgacctgctggtcgccaccgacgtcgccgctcgt
ggactggacgtcgagcagctcagccacgtggtcaactacgacgtgccgtccgccccggag
tcgtacgtgcaccgcatcggccgggtgggccgggctggccgggagggggtggcgatcacc
ctggccgagccccgggagcaccggatgctcaagaccatcgaacgggtcaccgggcaacgg
atcacgatcgacaagatccccaccgtggccgatctgcgtacccgccgactggaactgacc
caggccgcgctgcgggagagcctgctcgaggacgacctggagccgttccgggtgatcgtc
gagacgctcagcgacgagttcgacctgatggaggtggcgctggccgcggtgaagctggcg
cacgaggcgagcctgcccggctccgacgatgccgaagaggagatcccgcaggtcgcggtc
cgcccgtcccggccggtccgccccgagtacgagggacggggcgaacgtcggagcggacgc
ccccgcgccggaggcatgacgcaggtcttcgtggggctgggccggcgcgccggtgtccgg
ccgcaggatctggtcggtgccatcaccggagagaccaatgtgagcgggcgcgagatcggc
tcgatcgagatcgccgaccgcttctcgctggtggaggtgcccaacgcgctcgccgaagag
gtgatcgctgggctgcgcggcagcaccatcaagggccggcgcgccaccgtccgccgcgac
cgcgacacccgcacctga
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