Micromonospora sp. HM134: FJK98_00020
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Entry
FJK98_00020 CDS
T06145
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
mich
Micromonospora sp. HM134
Pathway
mich03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mich00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FJK98_00020 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mich03400
]
FJK98_00020 (recF)
DNA repair and recombination proteins [BR:
mich03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FJK98_00020 (recF)
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Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
AAA_16
DUF2813
Motif
Other DBs
NCBI-ProteinID:
QDY05744
UniProt:
A0A518W920
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Position
3853..4986
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AA seq
377 aa
AA seq
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MYVRRLELVDFRSYERVGVDLEPGPNVLTGANGVGKTNLVEALGYVATLDSHRVATDAPL
VRLGATAAVIRCAVVHDGRELLIELEIVPGKANRARLGRSPARRARDVIGALRLVLFAPE
DLELVRGDPAERRRYLDDLLVLRQPRYAGVRADYDRVVKQRNALLRTAYLARKTGGSRGG
DLSTLAVWDAHLARHGAELLAGRLELVAALTPHVAKAYDAVAAGAGAAGIAYRPSVELTG
VGTDREVLAEALTTALAESRSAEIERGTTLVGPHRDDLVLTLGPLPAKGYASHGESWSYA
LALRLAGYDLLRADGIEPVLVLDDVFAELDAGRRERLAELVGGAGQLLVTCAVDDDVPVA
LRGTRYAVGEGTVRRVD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgtccgccggctcgaactggtcgacttccgctcgtacgagcgggtcggcgtcgat
ctggagccggggccgaacgtcctgaccggcgcgaacggcgtcggcaagaccaacctggtc
gaggcgttgggctacgtggcgaccctggactcgcaccgggtcgccaccgacgccccgctg
gtccggctgggcgcgaccgccgccgtgatccgctgcgcggtggtgcacgacggccgggaa
ctgctgatcgagctggagatcgtccccggaaaggccaaccgggcccggctcgggcgctcc
ccggcccggcgggcccgggacgtgatcggcgcgctgcgactggtgctgttcgccccggag
gatctggaactcgtccggggcgacccggcggaacgccgccgctacctcgacgacctgctg
gtgctccggcagccccggtacgccggggtacgcgccgactacgaccgggtggtcaagcag
cgcaacgccctgctgcgtacggcgtacctggcccgcaagacgggcgggtcgcgcggcggt
gacctgtcgaccctggcggtctgggacgcccacctggcgcggcacggggccgagctgctc
gccggccggctggaactggtcgccgcgctcaccccgcacgtggcgaaggcgtacgacgcg
gtggcggcgggggccggggcggcggggatcgcgtaccggccgtcggtggagctgaccggg
gtgggcaccgaccgggaggtgctggccgaggcgttgaccaccgcgctggccgagtcccgg
tcggccgagatcgagcggggcaccacgctggtcgggccgcaccgcgacgacctcgtgctc
accctcggcccgctgcccgccaaggggtacgccagccacggcgagtcctggtcgtacgcg
ctggcgctgcggctggccgggtacgacctgctgcgcgccgacgggatcgagccggtgctg
gtgctcgacgacgtcttcgccgagctggacgcgggccggcgggaacggctggccgaactg
gtcggcggggccggtcagctcctggtgacctgtgcggtggacgacgacgtcccggtggcc
ctgcgcggcacccggtacgccgtcggcgaggggacggtccgtcgtgtcgactga
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