Micromonospora sp. HM134: FJK98_00045
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Entry
FJK98_00045 CDS
T06145
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mich
Micromonospora sp. HM134
Brite
KEGG Orthology (KO) [BR:
mich00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mich03032
]
FJK98_00045 (gyrB)
03400 DNA repair and recombination proteins [BR:
mich03400
]
FJK98_00045 (gyrB)
Enzymes [BR:
mich01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FJK98_00045 (gyrB)
DNA replication proteins [BR:
mich03032
]
Prokaryotic type
DNA Topoisomerases
FJK98_00045 (gyrB)
DNA repair and recombination proteins [BR:
mich03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FJK98_00045 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
QDY05748
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Position
7617..9563
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AA seq
648 aa
AA seq
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MAAQDKQDYGAESITVLEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNAVDEALAGYCD
TIDVVLLADGGVRVTDNGRGFPVDLHPKLKKPGVEVALTVLHAGGKFDGKAYAVSGGLHG
VGVSVVNALSTRMAVEIHKSGHVWRQKYHNSKPEPLDKGETTDRTGSAVSFWPDPDVFET
VDFDFQTIYRRLQEMAFLNRALSIHLLDERVAEGEEGKPREVTFFYEGGIADFVRHLNAS
KNPMHKTVVEFAAEEEGMSVEIAMQWNESYGESVYTFANTINTHEGGTHEEGFRAALTSV
VNRYGAEKKLLKGDEKLSGEDIREGLAAIISVKLANPQFEGQTKTKLGNTPVKSFVQRVC
NDRLVDWFDRNPAEAKTIIQKASQAARARIAAQQARKLARRKSLLESGSMPGKLADCQST
DPRESEVFIVEGDSAGGSAKQGRDPRTQAILPIRGKILNVEKARIDRVLKNNEVQALITA
LGTGIHDDFDMEKLRYHKVVLMADADVDGQHIQTLLLTLLFRFMRPLVELGHVYLAAPPL
YKIKWNRKGDDAQYAYSDRERDGLIALRQQKKPNAKPDDIQRFKGLGEMNYPELWETTMN
PATRTLRQVTLDDAATADELFSVLMGEDVEARRSFIQRNAKDVRFLDI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgcaggacaagcaggattacggcgcagagtcgatcaccgtcctcgaagggctg
gaggcggtccgcaagcgacccggcatgtacatcgggtcgaccggcgagcgtggcctgcac
cacctggtgtgggaggtcgtggacaacgcggtggacgaggcgctcgccggctactgcgac
accatcgacgtggtgctgctcgccgacggcggggtccgggtcaccgacaacggccgtggc
ttcccggtcgacctgcacccgaagctcaagaagccgggtgtcgaggtcgcgctgaccgtg
ctgcacgcgggtggcaagttcgacggcaaggcgtacgcggtctccggcggtctgcacggc
gtcggcgtctccgtggtgaacgccctctccacccggatggccgtcgagatccacaagtcc
ggccacgtgtggcggcagaagtaccacaactccaagcccgaaccgctggacaagggcgag
accaccgaccgcaccggctcggccgtctccttctggcccgacccggacgtcttcgagacg
gtcgacttcgacttccagaccatctaccgccgcctccaggagatggccttcctcaaccgg
gccctgtccatccacctgctcgacgaacgggtcgccgagggcgaggagggcaagccccgc
gaggtcaccttcttctacgagggcggcatcgccgacttcgtccggcacctcaacgcctcg
aagaacccgatgcacaagacggtcgtcgagttcgccgccgaggaagagggcatgtcggtc
gagatcgccatgcagtggaacgagtcgtacggcgagtcggtctacaccttcgccaacacg
atcaacacgcacgagggcggcacccacgaggagggcttccgggccgcgctgaccagcgtg
gtcaaccgctacggcgcggagaagaagctgctcaagggcgacgagaagctctccggcgag
gacatccgtgaggggctggccgcgatcatctcggtcaagctggccaacccgcagttcgag
ggtcagaccaagaccaagctcggcaacaccccggtgaagagcttcgtgcagcgggtctgc
aacgaccggttggtcgactggttcgaccgcaacccggccgaggccaagaccatcatccag
aaggcgtcccaggcggcgcgggcccggatcgccgcccagcaggcgcgcaagctggcccgg
cgcaagtcgctgctggagtcgggctcgatgcccggcaagctggccgactgccagtccacc
gacccgcgcgagtcggaggtcttcatcgtcgagggcgactcggccggcggctcggccaag
cagggccgcgacccgcgtacccaggcgatcctgccgatccgcggcaagatcctcaacgtg
gagaaggcccggatcgaccgggtgctcaagaacaacgaggtccaggcgctgatcaccgcc
ctgggcaccggcatccacgacgacttcgacatggagaagctgcggtaccacaaggtggtg
ctgatggccgacgccgacgtcgacggccagcacatccagacgctcctgctcaccctgctg
ttccgcttcatgcgtccgctggtcgagctgggccacgtctacctggccgccccgccgctc
tacaagatcaagtggaacaggaagggcgacgacgcccagtacgcgtactccgaccgggaa
cgcgacgggctgatcgcgctgcgccagcagaagaagcccaacgccaagccggacgacatc
cagcggttcaagggtctcggcgagatgaactatcccgagctgtgggagaccacgatgaac
ccggccacccggacgctgcgtcaggtcaccctcgacgacgccgcgaccgccgacgaactg
ttcagcgtgctgatgggtgaggacgtcgaggcccgccgctcgttcatccagcgcaacgcc
aaggacgtgcggttcctcgacatctga
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