Micromonospora sp. HM134: FJK98_02130
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Entry
FJK98_02130 CDS
T06145
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mich
Micromonospora sp. HM134
Brite
KEGG Orthology (KO) [BR:
mich00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mich03032
]
FJK98_02130 (topA)
03400 DNA repair and recombination proteins [BR:
mich03400
]
FJK98_02130 (topA)
Enzymes [BR:
mich01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FJK98_02130 (topA)
DNA replication proteins [BR:
mich03032
]
Prokaryotic type
DNA Topoisomerases
FJK98_02130 (topA)
DNA repair and recombination proteins [BR:
mich03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FJK98_02130 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
MarR_2
HC2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QDY06105
UniProt:
A0A518WA55
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All DBs
Position
435684..438536
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AA seq
950 aa
AA seq
DB search
MPSRAGTTRLVIVESPAKAKTISGYLGPGYVVEASFGHVRDLPRNAADVPAKYKGEPWAR
LGVDVDNGFHALYVVSADRKQQISKLVKLAKEVDEIFLATDEDREGEAIAWHLVETLKPK
VPVKRMVFHEITKPAIQAAVANPREIDRDLVDAQEARRILDRLYGYEVSPVLWKKVMPRL
SAGRVQSVATRIVVERERQRMAFRTAEYWDILATLAVAKPGEGPRTFNATLVALNGDRVA
TGKDFEPTTGRVRPGAGVVHLDESGARGLAARLDGRPFTVTRVEEKPYRRRPYAPFITST
LQQEAARKLRFSSQQTMRTAQRLYENGYITYMRTDSVNLSETAIAAARRQIVELYGERSV
PPEPRRYTGKVKNAQEAHEAIRPAGDNFRTPGDVAKELSGEEFKLYELIWRRTIASQMTD
AVGSSVSVRIRAVSVAQEEADFGATGKTITDPGFLRAYVESSDDENAEAEDAERRLPTLV
KDQPLTADELAAQGHHTQPPSRYTEASLVKALEELGIGRPSTYASIMQTIQDRGYVTKRG
QAMIPTFLAFAVIGLMERHYPRLIDYDFTASMENELDEIAGGDHAAVDFLTAFYFGSSNG
TGDQAIAHAGGLKKLVTENLSEIDARSVNSIPLHTDDEGREVVVRVGRFGPYLQRALPGE
QPTPKADGEEGGSQGDRAPIPEGLAPDELTPEKVHELFLGGGGERKLGDDPATGEPIVLK
SGRFGPYVASGERKSSLLRTQTPDSLTLDEALKLLSLPRVIGVAPDGAEVVANNGRYGPY
VKRGDEFRSLDSEDKMFTVTLDEALALLAAPKTRQRRAAAPPLREMGVDPLTEKPLVIKD
GRFGPYVTDGEFNASLRRGQTPEELTIEQASEMLAEKRAKGPAPKKAAKKAPAKKAPAKK
ATATKTTAAAKKTAAAKSAAAKRTTTATATTAKKAPAKKATPRKATTAAE
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagcagagctggaaccacccgtctggtcatcgtcgagtcaccggcgaaggccaag
acgatctcgggctacctcggcccggggtacgtcgtggaggccagcttcggccacgtccgg
gacctgccccgcaacgccgccgacgtgcccgccaagtacaagggcgagccgtgggcccgg
ctgggggtggacgtcgacaacggcttccacgccctctacgtcgtctcggccgaccgcaag
cagcagatcagcaagctggtgaagctggccaaggaggtcgacgagatcttcctggccacg
gacgaggaccgcgagggcgaggcgatcgcctggcacctggtggagaccctcaagcccaag
gtgccggtcaagcggatggtcttccacgagatcaccaagccggccatccaggcggcggtg
gcgaacccccgcgagatcgaccgggatctggtcgacgcccaggaggcccgccgcatcctc
gaccggctctacggctacgaggtctccccggtgctgtggaagaaggtcatgccgaggctg
tcggcgggccgggtgcagtccgtggcgacccggatcgtggtcgagcgggaacgccagcgg
atggccttccgcaccgcggagtactgggacatcctcgccaccctcgcggtggcgaagccg
ggcgagggcccgcgcaccttcaacgccaccctggtcgccctcaacggtgaccgggtcgcc
accggtaaggacttcgagccgaccaccggccgggtgcggcccggcgcgggcgtggtgcac
ctcgacgagagcggggcgcgcggcctggcggcccgcctcgacgggcggccgttcaccgtc
acccgggtcgaggagaagccctaccgccgccgcccgtacgcgccgttcatcacctccacc
ctccagcaggaggcggcccgcaagctgcggttctcgtcgcagcagacgatgcgcaccgcg
cagcggctctacgagaacggctacatcacctacatgcgtaccgactcggtgaacctctcc
gagacggccatcgcggcggcccgccggcagatcgtcgagctgtacggcgagcgcagcgtg
ccaccggagccgcgtcgctacaccggcaaggtgaagaacgcccaggaggcgcacgaggcg
atccgcccggcgggcgacaacttccgcaccccgggcgacgtggccaaggagctgtccggc
gaggagttcaagctctacgagctgatctggcggcgcaccatcgcctcgcagatgaccgac
gcggtcggctccagcgtgtcggtgcgcatccgggcggtctccgtcgcccaggaggaggcc
gacttcggcgccaccggcaagaccatcaccgacccgggcttcctgcgcgcgtacgtcgag
tccagcgacgacgagaacgccgaggccgaggacgccgagcgtcggctgcccaccctggtc
aaggaccagccgctgaccgccgacgagttggccgcgcagggccaccacacccagccgccg
tcgcgctacaccgaggcgtcgctggtcaaggcgctggaggaactgggcatcggtcgcccg
tcgacgtacgcgtcgatcatgcagacgatccaggaccggggctacgtcaccaagcgcggc
caggcgatgatcccgacgttcctggcgttcgcggtgatcgggctgatggaacggcactac
ccgcgtctgatcgactacgacttcaccgccagcatggaaaacgagctggacgagatcgcc
gggggcgaccacgccgccgtcgacttcctcaccgcgttctacttcggcagcagcaacggc
accggtgaccaggccatcgcccacgcgggcgggttgaagaaactggtcaccgagaacctc
agcgagatcgacgcgcgcagcgtcaactcgatcccgctgcacaccgacgacgaggggcgc
gaggtcgtcgtccgggtcggccggttcgggccgtacctgcaacgggccctgcccggcgag
cagccgacgccgaaggccgacggcgaggagggcggcagccagggcgaccgggcgccgatc
ccggaggggctggcccccgacgagctgaccccggagaaggtgcacgagctgttcctcggc
gggggcggcgagcgcaagctcggcgacgatccggccaccggggaaccgatcgtgctcaag
tccggccggttcggcccgtacgtcgcgagcggcgagcggaagtcgtcgctgctgcgcacg
cagacgccggactcgctcaccctcgacgaggcgttgaagctgctcagcctgccccgggtg
atcggggtcgccccggacggtgccgaggtcgtcgccaacaacggccgctacggcccgtac
gtcaagcgcggtgacgagttccgctcgctggactcggaagacaagatgttcaccgtcacc
ctcgacgaggcgctggcgctgctggccgccccgaagacccgccagcgtcgggccgccgcg
cccccgctgcgcgagatgggcgtcgacccgctgaccgagaagccactggtgatcaaggac
ggccggttcgggccgtacgtcaccgacggggagttcaacgcgtcgctgcggcgcgggcag
accccggaggaactgaccatcgagcaggcgtcggagatgctggccgagaagcgggccaag
ggaccggccccgaagaaggcggcgaagaaggcccctgccaagaaggctcccgccaagaag
gccacggcgacgaagaccaccgccgcggccaagaagaccgccgccgcgaagtccgccgcc
gcgaagcggaccaccaccgccacggccaccacggcgaagaaggcccccgccaagaaggca
accccccgcaaggccaccaccgccgccgagtaa
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