Micromonospora sp. HM134: FJK98_16020
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Entry
FJK98_16020 CDS
T06145
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mich
Micromonospora sp. HM134
Pathway
mich00040
Pentose and glucuronate interconversions
mich01100
Metabolic pathways
mich02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mich00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
FJK98_16020
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FJK98_16020
Enzymes [BR:
mich01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
FJK98_16020
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
QDY08477
UniProt:
A0A518WGY8
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Position
complement(3759604..3760950)
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AA seq
448 aa
AA seq
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MRPRTTGAALVALSLLLTPGTAASAAPPDGPSRAVERLARQTLPAGDGWAAEGPGTTGGA
AAGPDQVHLVRSRADLVRALGGDNATNRSNATPKVIVVDGTVDGFAADDGHLLGCADLAD
PEYSLPAYLAAYDPVVWGMVPPTGALEAARVRSVANQTRQTQINVGPNTTIVGRRGAVLT
GLTLMIDGASNVIVRNLTFDDARDCFPAWSPTDGATGNWNSQYDQVSVRRSEHVWVDHNT
FTDGDNPDSGQPVYFGRPYQVHDGSLDITHTASLVTASYNRFTGRDKLMLIGSSNTVGPD
VGRLKVTLHHNLFDRVLQRLPRVRFGQVDVYNNWYRLAGDDFVYAIGVGVQSAAYVENNF
FTLGVGIAAGDLLYDWGGTAVTTRGNWVDADRALPRPVDLVAAYNASHDPDLGGDAGWTP
TLRAPQAVPAPLVPLVVGPFAGAGRLPL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccacgcaccaccggggcggccctggtcgccctgtccctcctgctgaccccgggc
accgccgcgtccgccgcgccgcccgacgggccgtcccgggccgtcgagcggctcgcccgg
cagaccctgccggccggcgacggctgggcggccgagggccccggcaccaccggcggcgcg
gcggccggcccggaccaggtccacctggtgcgcagccgggccgacctggtccgggcgctg
ggcggcgacaacgccaccaaccggagcaacgccaccccgaaggtgatcgtcgtggacggc
accgtcgacgggttcgccgccgacgacggccacctgctcggctgcgccgacctggccgac
ccggagtacagcctgcccgcctacctggccgcgtacgacccggtggtgtggggcatggtg
ccgccgaccggggcgctggaggccgcccgggtgcggtcggtggccaaccagacccggcag
acgcagatcaacgtcggccccaacaccaccatcgtcggccggcgcggggcggtcctcacc
gggctgaccctgatgatcgacggggccagcaacgtcatcgtccgcaacctgaccttcgac
gacgcccgggactgcttcccggcgtggtcgcccaccgacggcgcgaccggcaactggaac
tcccagtacgaccaggtctcggtacgccgcagcgagcacgtctgggtcgaccacaacacc
ttcaccgacggcgacaacccggacagcgggcagccggtgtacttcggccggccctaccag
gtgcacgacgggtcgctggacatcacgcacaccgccagcctggtgaccgcctcgtacaac
cggttcaccggaagggacaagctgatgctgatcggctcgtccaacacggtcgggccggac
gtgggccggttgaaggtgacgctgcaccacaacctgttcgaccgggtgctccagcggctg
ccccgggtccggttcggccaggtcgacgtctacaacaactggtaccggctggccggcgac
gacttcgtgtacgcgatcggggtgggtgtgcagtccgccgcgtacgtggagaacaacttc
ttcaccctcggcgtcggcatcgccgccggtgacctgctgtacgactggggtggcaccgcc
gtcaccacccggggcaactgggtggacgccgaccgcgcgctgccccgcccggtcgacctg
gtggccgcctacaacgcgagccacgacccggacctgggcggcgacgccgggtggacgccg
accctgcgcgcgccgcaggcggtgcccgcgccgctggtgccgctcgtggtggggccgttc
gccggggccggtcgactgccgttgtga
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