Micromonospora sp. HM134: FJK98_23300
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Entry
FJK98_23300 CDS
T06145
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mich
Micromonospora sp. HM134
Pathway
mich03030
DNA replication
mich03410
Base excision repair
mich03420
Nucleotide excision repair
mich03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mich00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FJK98_23300 (polA)
03410 Base excision repair
FJK98_23300 (polA)
03420 Nucleotide excision repair
FJK98_23300 (polA)
03440 Homologous recombination
FJK98_23300 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mich03032
]
FJK98_23300 (polA)
03400 DNA repair and recombination proteins [BR:
mich03400
]
FJK98_23300 (polA)
Enzymes [BR:
mich01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FJK98_23300 (polA)
DNA replication proteins [BR:
mich03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FJK98_23300 (polA)
DNA repair and recombination proteins [BR:
mich03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FJK98_23300 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJK98_23300 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_A_exo1
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QDY09711
UniProt:
A0A518WKJ3
LinkDB
All DBs
Position
complement(5415043..5417751)
Genome browser
AA seq
902 aa
AA seq
DB search
MTATTPRLLLVDGHSLAYRAFFALPVENFSTTTGQPTNAVYGFTSMLINVLRDEQPTHIV
VAFDVSRRSFRTEKYAEYKAGRSETPADFKGQVSLVKEVLDALRVPVVEREGYEADDVIA
TLACQARDQGMQVLISTGDRDAFQLVGDDVTVLYPRKGVSDLARMDPAAIEAKYGVGPQR
YRDLAALVGETSDNLPGIPGVGPKTAAKWINTYGGVEGVIAHADEIKGKAGDSLRERLAD
VIRNYEINCLVSDLELPIRPEDARWQGWDREAVHQVFDTLQFRILRDRLYQYLEAVEPEA
EAGFDLAGERLTAPGALVDWLAAHVPTGTQVGVAVKTPAKPTNPRERYEPQLDALALALA
SGPAAWLDPTTLAEADERALAAWLADPAQPKVLHDSKHARLAFAGRGWSLAGVARDTELA
AYLARPDQRSYDLTDLALRYLHRELRVDAPETGQLAFDGLGDDGEAEQNLMLQARATLDL
ADAIDAELSRDGEQSARLMAEVELPLSEVLAGMQRVGIGADLDYLQELEAHFAGEVKAAA
QGAYASVGREFNLGSPKQLQELLFGELGLPKTKKIKTGYTTDADALQWLYAQNPHPVLEH
LLRHRDVAKLKTTVDGLLKSVADDGRIHTTFKQTVAATGRLSSTDPNLQNIPIRTEEGRR
IRRAFVVGDGYQTLLTADYSQIEMRIMAHLSLDEALIEAFNSGHDFHAATASSVFTVPVG
EVTPDQRRKIKAMNYGLAYGLSAFGLSQQLGITAEEARGLMENYFAGFGGVRDYLHEVVA
RARQDGYTSTVLGRRRYLPDLVSDNRQRRDMAERMALNAPIQGSAADIIKVAMLRVDTAL
RDAGLRSRMLLQVHDELVFEVAPDEREALETLVRQEMGAAYPLSVPLEVSVGAGRDWNSA
DH
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
gtgacagctacgacgccgcgcctgctcctcgtcgacggacattccctggcataccgggcg
ttcttcgccctgccggtggagaacttctccaccacgaccgggcagccgaccaacgcggtc
tacggcttcacctcgatgctgatcaacgtgctccgcgacgagcagcccacccacatcgtg
gtcgccttcgacgtctcccgccgctccttccgcaccgagaagtacgcggagtacaaggcc
ggccgcagcgagaccccggccgacttcaagggccaggtcagcctggtcaaggaggttctc
gacgcgctgcgcgtcccggtcgtcgagcgggagggctacgaggccgacgacgtcatcgcc
accctcgcctgccaggcccgcgaccagggcatgcaggtgctgatcagcaccggcgaccgg
gacgccttccagctcgtcggcgacgacgtcaccgtgctctacccgcgcaagggcgtctcc
gacctggcccggatggacccggccgcgatcgaggccaagtacggcgtcggcccgcagcgc
taccgcgacctggccgccctggtcggcgagaccagcgacaacctgcccggcatccccggc
gtcggcccgaagacggccgccaagtggatcaacacctacggcggggtcgagggcgtgatc
gcccacgccgacgagatcaagggcaaggccggcgacagcctgcgcgagcggctcgccgac
gtgatccgcaactacgagatcaactgcctggtctccgacctggagctgccgatccgcccc
gaggacgcccgctggcagggctgggaccgcgaggccgtgcaccaggtcttcgacaccctc
cagttccgcatcctgcgcgaccggctgtatcaatacctggaggcggtggagccggaggcc
gaggccggcttcgacctggccggcgagcggctcaccgcgcccggcgcgctggtcgactgg
ctggccgcgcacgtccccaccggcacccaggtcggcgtggcggtgaagaccccggccaag
ccgacgaacccccgcgagcgctacgagccgcagctcgatgcgctggccctcgcgctggcc
tccggcccggcggcgtggctcgacccgaccactctggccgaggcagacgagcgggccctg
gccgcctggttggccgacccggcgcagccgaaggtgctgcacgacagcaagcacgcccgg
ttggcgttcgccggccggggctggtccctggccggcgtcgcccgggacaccgagctggcc
gcctacctggcccgccccgaccagcgctcctacgacctgaccgacctggcgctgcgttac
ctgcaccgcgagctgcgggtcgacgcgccggaaaccggccagctcgccttcgacggcctc
ggcgacgacggcgaggccgagcagaacctgatgctccaggcccgcgccaccctcgacctg
gccgacgcgatcgacgccgagctgtcccgcgacggcgagcagtccgcccggctgatggcc
gaggtggagctgcccctgtccgaggtgctcgccgggatgcagcgcgtcggcatcggcgcc
gacctggactacctccaggagttggaggcgcacttcgcgggcgaggtgaaggccgccgcc
cagggcgcgtacgcctcggtggggcgggagttcaacctgggctcgcccaagcagctccag
gagctgctcttcggggagttggggctgcccaagaccaagaagatcaagaccgggtacacc
accgacgccgacgcgctccagtggctctacgcccagaacccgcatccggtgctggagcac
ctgctgcgccaccgggacgtggcgaagctcaagaccaccgtcgacggcctgctcaagtcg
gtcgccgacgacgggcgcatccacaccacgttcaagcagaccgtggcggccaccggtcgg
ctctcctccaccgaccccaacctgcagaacatcccgatccgcaccgaggagggccggcgc
atccgccgggccttcgtggtgggcgacggctaccagaccctgctcaccgccgactacagc
cagatcgagatgcggatcatggcgcacctgtcgctggacgaggcgctgatcgaggcgttc
aactccggccacgacttccacgccgccaccgcgtcgtcggtcttcaccgtcccggtcggc
gaggtcacccccgaccagcgccgcaagatcaaggcgatgaactacggcctggcgtacggg
ttgagcgccttcggcctgtcccaacagctcggcatcaccgccgaggaggcccgggggctg
atggagaactacttcgccggcttcggcggggtgcgcgactacctgcacgaggtggtggcc
cgcgcccgccaggacggctacacctccaccgtcctgggtcgccgccgctacctgcccgac
ctggtcagcgacaaccggcagcgccgggacatggccgagcggatggcgctcaacgccccc
atccagggctcggcggccgacatcatcaaggtcgccatgctgcgcgtcgacaccgcgctg
cgcgacgccgggctgcggtcccggatgctgctccaggtgcacgacgaactggtcttcgag
gtcgcccccgacgagcgggaggcgttggagacgctggtccggcaggagatgggggcggcg
tacccgctgtcggtgccgctggaggtctccgtcggcgcggggcgggactggaacagcgcc
gaccactag
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