Micromonospora sp. HM134: FJK98_23975
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Entry
FJK98_23975 CDS
T06145
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mich
Micromonospora sp. HM134
Pathway
mich03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mich00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FJK98_23975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mich03400
]
FJK98_23975
Enzymes [BR:
mich01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
FJK98_23975
DNA repair and recombination proteins [BR:
mich03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FJK98_23975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QDY09829
UniProt:
A0A518WKQ5
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All DBs
Position
5571530..5572390
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AA seq
286 aa
AA seq
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MSAHRPVGSHTPTSGGLARAALPYVDATGSRVVQVYVSNSRGWALPPGDPAQDALFAEGC
AARGVPVYIHASLLVNLGSPTAATVEKSVQTLAHALRRGRAIGARGVVFHAGSAVDADYA
ETALRQVRESLLPLLDETTAGGGPLLLVEPSAGGGRSLASRVEHLGPYLDAVDRHPGLGV
CFDTCHAWAAGHDLAVAGGMTATLDTLVATVGADRLKLIHANDSKDLCGSTRDRHENIGK
GNIGEPAFAELMTHPATAGIPVVVETPTDKHEGHATDIATLTRLHP
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcccaccggccggtcggctcgcacacccccacctcgggtgggctggccagggcg
gccctgccgtacgtggacgcgaccggctcccgggtggtgcaggtctacgtctccaactcg
cggggctgggcgctgccgcccggcgacccggcccaggacgcgctgttcgccgagggctgc
gccgcccggggcgtgccggtctacattcacgcgtcgctgctggtcaacctcggttcgccc
acggccgcgacggtggagaagtcggtgcagacgctggcgcacgcgctacgccgggggcgg
gcgatcggggcccggggcgtggtgttccacgccggcagcgcggtcgacgccgactacgcc
gagaccgccctgcggcaggtacgcgagtcgctgctgccgctgctcgacgagaccacggcc
ggcggcggtccactgctgctggtggagccgagcgccggtggcggccggtcgctggcctcc
cgggtggagcacctcggcccctacctggacgcggtggaccggcatccggggttgggcgtc
tgtttcgacacctgccacgcctgggcggccgggcacgacctggccgtggcgggcggcatg
acggcaaccctggacaccctggtcgccacggtcggggcggaccggctcaagctgatccac
gccaacgactccaaggacctgtgcggctcgacccgggaccggcacgagaacatcggcaag
ggcaacatcggcgaaccggcgttcgccgagttgatgacccacccggcaaccgccggcatc
cccgtcgtcgtggaaacccccaccgacaagcacgagggccacgccaccgacatagccacc
ctcacccgcctccacccctag
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