Micromonospora sp. HM134: FJK98_27835
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Entry
FJK98_27835 CDS
T06145
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mich
Micromonospora sp. HM134
Pathway
mich03420
Nucleotide excision repair
mich03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mich00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FJK98_27835
03430 Mismatch repair
FJK98_27835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mich03400
]
FJK98_27835
Enzymes [BR:
mich01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJK98_27835
DNA repair and recombination proteins [BR:
mich03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJK98_27835
MMR (mismatch excision repair)
Other MMR factors
FJK98_27835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QDY10483
UniProt:
A0A518WML4
LinkDB
All DBs
Position
complement(6424750..6428238)
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AA seq
1162 aa
AA seq
DB search
MTQPTLFSAATPAPRAADAGPRYTPVELARLLRLDAPTTEQAAIIAAPVAPLLVVAGAGS
GKTETMAARVVWLVANSYVRPEQILGLTFTRKAAGELAHRVRTRLDQLVRRLGRRARNPL
DDPLAGEPTVATYHSYAGRIVTEHGLRAGYEPTTRLLTEASRWQLVDLLVRNYDGDMSEV
DRMPSTVTDAVLALAGELDEHLVDPDALAAWTGRFFAEVQAHPGRVYADVRRALQLQRTR
LKLLPLVRAYARRKDDFEAMDFADQLARAARVARDHPAVGAVERDRYRVVLLDEYQDTSH
AQVVLLNHLFGGGHPVTAVGDPCQSIYGWRGASAGTLDRFPTDFAHADGTPAGAMSLTTS
WRNRPEILGVANTLSVPLRAAGARVPELHAAMSVRDPIPHRSPRGRAAGTVHCALLPTYV
DEADWIADSVLAAWRGAARMPGALPEHIPVPQRPSTAVLVRVRSQIPAIEAALRARGLPV
EVVGLGGLLDTPEVRDVVCTLRVLADPTDGAALLRLLTGARWRIGPRDLVALHRRARALA
RARREVTGDDGPEIVVDALDEATLVEALADLGPAQAYSAEGYARLRSYGMELALLRYRLD
QTLPELIADVERTIGLDVEVAVRAGRDGTGDAGLARGHLDALGDVAARFSGETPAATLAG
FLAYLAAAEDEERGLSPGEVEVVEGAVQVLTAHAAKGLEWDVVAVAGLTRGGWPGQVRNS
DHWLGGLGVLPFPLRGDADGLPALDLAEVTDQRGVARAVADFTDAWRAHDEREERRLAYV
AVTRPRRLLLCSGYWWGEGTKRFRGPSVLLREVYDACLTGGDGLLIDEWAPEPAGDAVNP
TTALVLRADWPADPLGPRRPALTEAAALVRRFLADPDAARRAPAPTPASGDLADPQAVDQ
EAAGPSAAGAQAAGPATAAPEPDPEVARWRREADLLLAERAELLRQAEAVEVTLPGHLSV
TQLVALRRDPAQLARTLRRPMPTPPSPYARRGTAFHAWLESRFGIDRLLDVDELPGAADA
DAAPDGALAELQERFLASEWADRVPVEVEVPFATVLAGVVVRGRMDAVFSRPGGRYDVVD
WKTGRQPTGAEAEVVAVQLAVYRLAWAELAGVPVDRVGAAFHYVREGVTVRPADLLDADG
LTAIIAGLPENPVGGGAAGDPW
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgacccagccgacgctgttcagcgccgccacccccgccccgcgcgccgccgacgccggg
ccgcgctacacgccggtggagctggcccggctgctccggctggacgcccccaccaccgaa
caggccgcgatcatcgcggcacccgtcgcgccgctgctggtggtggccggtgccggctcg
ggcaagaccgagacgatggccgcccgggtggtgtggctggtcgccaactcgtacgtgcgc
ccggaacagatcctcgggctgaccttcacccgcaaggcggccggtgagctggcgcaccgg
gtgcgtacccggctcgaccagctggtgcggcggctcggccggcgggcccgcaacccgctg
gacgatccacttgccggcgagcccaccgtcgccacctaccactcgtacgccgggcggatc
gtcaccgagcacgggctgcgggccggctacgagccgaccacccggctgctcaccgaggcg
tcccggtggcagctcgtcgacctgctggtccgcaactacgacggcgacatgtccgaggtc
gaccggatgcccagcaccgtcaccgacgccgtcctcgcgctggccggcgagctggacgag
cacctggtcgacccggacgccctggccgcctggacgggccggttcttcgccgaggtgcag
gcccaccccgggcgggtctacgccgacgtccgcagggccctccagctgcaacggacccgg
ctgaagctgctgccgctggtgcgggcgtacgcccggcgcaaggacgacttcgaggcgatg
gacttcgccgaccagctcgcccgcgccgcccgggtggcccgcgaccacccggcggtcggc
gcggtcgagcgggaccgttaccgggtggtgctgctcgacgagtaccaggacaccagccac
gcccaggtggtgctgctcaaccacctcttcggcggcggtcacccggtcaccgcggtcggc
gacccctgccagtcgatctacggctggcggggggccagcgccggcacgctcgaccggttc
cccaccgacttcgcccacgccgacggcacccccgccggggcgatgagcctcaccaccagt
tggcgcaaccggccggagatcctcggggtggccaacacgttgtcggtgccgctgcgggcg
gccggcgcccgggtgccggagctgcacgccgcgatgagcgtccgcgacccgatcccgcac
cgcagcccgcgcgggcgggccgccggcaccgtgcactgcgcgctgctgcccacgtacgtc
gacgaggcggactggatcgccgacagcgtgctcgccgcctggcggggggcggcccggatg
cccggcgcgctgcccgagcacatcccggtgccgcagcgcccctccaccgccgtgctggtc
cgggtccgcagccagatcccggcgatcgaggcggccctgcgcgcccgggggctgccggtc
gaggtggtcggcctgggcgggctgctggacaccccggaggtacgggacgtggtctgcacc
ctgcgggtgctggccgacccgaccgacggcgcggcgctgctgcgcctgctgaccggggcg
cgctggcggatcgggccgcgtgacctggtggccctgcaccgacgggcgcgggccctcgcc
cgggcccgccgggaggtgaccggcgacgacgggccggagatcgtcgtggacgccctcgac
gaggcgaccctggtggaggcgctcgccgatctggggccggcgcaggcgtactcggcggag
ggctacgcgcggctgcggtcgtacgggatggaactggcgctgctgcgctaccggctggac
cagacgctgccggagctgatcgcggacgtggaacgcaccatcgggctggacgtcgaggtg
gcggtccgggccggccgggacggcaccggcgacgccggtctggcccgggggcacctggac
gcgctcggcgacgtggcggcccggttcagcggcgagaccccggcggcgacgctcgccggt
ttcctggcctacctggccgccgccgaggacgaggagcgggggctgtccccgggcgaggtg
gaggtggtggagggcgcggtgcaggtgctcaccgcgcacgccgccaagggcctggagtgg
gacgtcgtcgcggtcgccgggttgacccggggcggctggcccggtcaggtccgcaactcc
gaccactggctgggcgggctcggcgtgctgccgttcccgctgcgcggcgacgccgacggg
ctgcccgcgctcgacctggccgaggtgaccgaccagcggggggtggcgcgggcggtggcc
gacttcaccgacgcctggcgggcgcacgacgaacgcgaggaacgccggctggcgtacgtg
gcggtgacccggccccggcggctgctgctctgctccgggtactggtggggggaggggacc
aaacggttccggggcccgtcggtgctgctccgcgaggtgtacgacgcctgcctgaccggt
ggcgacggcctgctgatcgacgagtgggcgcccgagccggccggggacgcggtcaatccg
accaccgcgctggtgttgcgggccgactggccggccgacccgctgggcccccgccggccg
gcgctgaccgaggcggcggccctggtccgccgtttcctcgccgaccccgacgcggcccgc
cgcgctcccgcccccaccccggccagcggtgacctggctgatccgcaggcggtggaccag
gaggcggcgggcccatcggcggcgggtgcgcaggcggcgggcccggcgacggctgctccg
gagcccgatccggaggtggcccggtggcggcgggaggcggacctgctcctggccgagcgg
gcggagctgctgcggcaggccgaggcggtcgaggtgacgctgcccggccacctgtcggtg
acccagctggtggccctgcgccgggacccggcccaactggcccgtacgctgcgccggccg
atgcccaccccacccagcccgtacgcccggcggggcaccgccttccacgcctggctggag
tcccggttcgggatcgaccggctgctcgacgtggacgagttgccgggtgccgccgacgcg
gacgccgcgcccgacggggcgctggccgagctccaggaacgcttcctggccagcgagtgg
gccgaccgggtgccggtggaggtggaggtgccgttcgccacggtgctggccggcgtggtg
gtccggggccggatggacgccgtcttctcccgccccggcggccggtacgacgtggtcgac
tggaagaccggccggcagccgaccggcgcggaggccgaggtggtcgcggtgcagttggcc
gtctaccggctggcctgggcggagctggccggggtgccggtggaccgggtgggggccgcc
ttccactacgtacgggagggggtgacggtgcgcccggccgacctgctggacgccgacggg
ctgaccgcgatcatcgccgggttgccggaaaatccggtagggggtggcgcggcgggagat
ccgtggtaa
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