Micromonospora sp. HM134: FJK98_28290
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Entry
FJK98_28290 CDS
T06145
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mich
Micromonospora sp. HM134
Pathway
mich03420
Nucleotide excision repair
mich03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mich00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FJK98_28290 (pcrA)
03430 Mismatch repair
FJK98_28290 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mich03400
]
FJK98_28290 (pcrA)
Enzymes [BR:
mich01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJK98_28290 (pcrA)
DNA repair and recombination proteins [BR:
mich03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJK98_28290 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
FJK98_28290 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QDY10564
UniProt:
A0A518WMU3
LinkDB
All DBs
Position
complement(6526024..6528426)
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AA seq
800 aa
AA seq
DB search
MHPLFDIPASPPAPEPASVPPRRPGPAHRLDPQALVEGLNGPQRDAVTHSGSPLLIVAGA
GSGKTRVLTHRIAYLLAARDVHPGEIIAITFTNKAAGEMKERVAHLVGPRARLMWVSTFH
SACVRILRAEHEHAGLKSTFSIYDADDSRRLMQLVARELDLDPKRYPARGLAAQVSNLKN
ELVDPEEFAGRAKGPNERALAEAYTLYQRRLREAHALDFDDLIMTTVHLLQSHPHVAESY
RRRFRHVLVDEYQDTNHAQYTLIKELVAGTEGVAPAELCVVGDADQSIYAFRGATIRNIL
EFERDFTDARTILLEQNYRSTQTILNAANAVIDRNTSRKPKRLWSDAGAGEQIVGYVADT
EHAEADWVGREVDRLVDAGETRPGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYE
RKEVRDALAYLRAVVNDDDTVSLRRVLNTPRRGIGDRAEACVEALSSRERISFGAALRRA
RDAPGISTRAANAIGEFVALLDGARELAEEGTPEEVLEALLTRSGYLTELEESLDPQDAG
RVDNLQELVSVAREYTERIEALGADDERATLAGFLEQVALVADADQIPSDDPDHQGVVTL
MTLHTAKGLEFPVVFLTGLEDGVFPHLRSLGDTRELEEERRLAYVGITRARQRLYLSRAV
TRSAWGQPSYNPPSRFLEELPPELVRWERTEGTYTSWAGGGGGVGGRADRAPGGRGGFTG
GTPRAAELAKRLGVDASRLATASELPQGPKVSAGDRVNHQRYGLGRVLAVEGHGPSARAQ
IDFGDQTMWLVLRHAPLDKL
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcatcctctcttcgacatccccgcgtccccgcccgcgcccgagcccgcgtcggttccg
ccgcgccggcccggccccgcccaccgcctcgacccgcaggccctggtggagggcctgaac
ggcccccaacgggacgcggtcacccattccggctcgccactgctgatcgtggccggggcc
gggtccggcaagacccgggtgctcacccaccggatcgcctacctgctcgccgcgcgggac
gtccaccccggcgagatcatcgcgatcaccttcaccaacaaggccgccggtgagatgaag
gagcgggtcgcccacctggtcggcccgcgcgcccggctgatgtgggtgtcgacgttccac
tccgcctgcgtgcgcatcctgcgggccgagcacgagcacgccggcctgaagtcgaccttc
tccatctacgacgccgacgactcccgccggttgatgcagttggtcgcccgggagctggat
ctcgacccgaagcgctacccggcccgggggctggccgcccaggtgtccaacctgaagaac
gagctggtcgacccggaggagttcgccggccgggccaaggggcccaacgagcgggccctg
gccgaggcgtacacgctctaccagcggcggctgcgggaggcgcacgcgctggacttcgac
gacctgatcatgacgacggtgcacctgctccagtcgcacccgcacgtcgccgagagctac
cgtcgccggttccggcacgtcctggtcgacgagtaccaggacaccaaccacgcgcagtac
accctgatcaaggagctggtcgccggcaccgagggggtcgcgccggccgagctgtgcgtg
gtcggcgacgccgaccagtcgatctacgcgttccggggcgccacgatccgcaacatcctg
gagttcgagcgggacttcaccgacgcccggacgatcctgctggagcagaactaccgttcc
acccagaccatcctcaacgccgccaacgcggtgatcgaccggaacacctcccgcaagccc
aagcggctgtggagcgacgccggggcgggtgagcagatcgtcgggtacgtcgccgacacc
gagcacgccgaggccgactgggtgggccgggaggtcgaccggctggtcgacgcgggggag
acccgccccggcgacgtcgccgtcttctaccgcaccaacgcccagtcccgggtcttcgag
gaggtgttcatccgggtcggcctgccctacaaggtggtcggcggggtgcgcttctacgag
cgcaaggaggtccgcgacgcgctggcctacctgcgcgcggtggtcaacgacgacgacacg
gtcagcctccgtcgggtgctgaacaccccgcgccggggcatcggcgaccgggccgaggcg
tgcgtcgaggcgctgtccagccgggagcggatctccttcggagcggcgctgcgccgggcc
cgggacgcgccgggcatctccacccgggccgccaacgcgatcggcgagttcgtcgcgctg
ctcgacggcgcgcgcgagctggccgaggagggcaccccggaggaggtgctggaggcgctg
ctgacccggtcgggctacctgaccgagctggaggagagtctcgacccgcaggacgccggc
cgggtcgacaacctccaggaactggtcagcgtcgcccgggagtacaccgagcggatcgag
gcgctgggcgccgacgacgagcgggccaccctggccggtttcctggagcaggtggcgctg
gtcgccgacgccgaccagatcccctccgacgaccccgaccatcagggtgtcgtgacgctc
atgaccctgcacaccgccaagggcctggagttcccggtggtgttcctgaccggtctggag
gacggcgtcttcccccacctgcggtcgctgggcgacacccgggagctggaggaggagcgg
cggctggcgtacgtgggcatcacccgggcccggcagcggctctacctgtcccgggcggtc
acccgttcggcctgggggcagccgtcgtacaacccgccgtcgcggttcctggaggagttg
ccgccggagctggtccgctgggagcgcaccgaggggacgtacacctcgtgggccggtggg
ggcggcggcgtcggcggtcgcgcggaccgcgcgcccggcgggcgtggcggcttcaccggg
ggcaccccgagggcggcggagctggcgaaacggctcggggtggacgccagccggctggcc
accgccagcgagctgccgcaggggccgaaggtgtcggccggcgaccgggtcaaccaccag
cgctacggcctggggcgggtgctcgcggtcgagggccacgggccgagcgcccgcgcgcag
atcgacttcggcgaccagaccatgtggctggtgctgcggcacgccccgctcgacaagctc
tga
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