Micromonospora sp. HM134: FJK98_28950
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Entry
FJK98_28950 CDS
T06145
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mich
Micromonospora sp. HM134
Pathway
mich03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mich00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FJK98_28950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mich03021
]
FJK98_28950
03400 DNA repair and recombination proteins [BR:
mich03400
]
FJK98_28950
Enzymes [BR:
mich01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FJK98_28950
Transcription machinery [BR:
mich03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FJK98_28950
DNA repair and recombination proteins [BR:
mich03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FJK98_28950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QDY10681
UniProt:
A0A518WN67
LinkDB
All DBs
Position
complement(6661495..6665385)
Genome browser
AA seq
1296 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPQRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFASYVVTSVDAEARHRDLSTIENEILAEKRQSENSRDSEIEKRAAKLEAD
LAELEAEGAKADVRRKVKEGGEREMRQIRDRAQREIDRLDEVLDTFRKLDSKQLVTDELL
YRELRDRFGEYFTGGMGAEAIKALVQNMDLDAEAESLRETIRSGKGQRKIRALKRLKVVA
AFLNTRNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPKLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PVVWDVLEEVIGEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGKPVTMPTQDMVIGLYHLTHLTPGGVGEGR
AFSSDAEARMAFDAGELHLQTPVKIRLRDVIGVDNGNGAEPWVAPEGWVEGEPLTVETTL
GRVLFNETLPQGYRFVNYEIRKGQLSAIVNDLAERFPKVALAATLDGLKEAGFHWATWSG
VTIGMEDVIAPPRKREILERYEKEADRIDKQYQRGLMTAEERRGELIEIWTKATNEVAKE
MDTALPQENPLWKMINSGARGNLLQLRQIAAIRGLVANPKGEIIPRPIKASYREGLSVLE
YFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRAIPMQIGERLEGG
RLVVHEHAETSVHARTLADDIKGPDGTVVAHRGQDINSIGVDKIVAAGVETVRVRSVLTC
ESKLGVCGACYGRSLPTGKTVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITQG
LPRVQEIFEARIPKGKAPIADTPGRIRIEDGERSRKIIVVPDDGSDEIVYDKISKRVRLR
THDGDHVEVGEKLTEGTIDPHELLRILGPRAVQVHLTQEVQEVYRSQGVLIHDKHIEIII
RQMLKRVTVIDSGSTEFLPGVLVDRALFESENRRLVGEGGEPAAGRPVLMGITKASLATD
SWLSAASFQETTRVLTDAAINSRSDSLVGLKENVIIGKLIPAGTGISKYRNVRVEPTEEA
KAKVYSMTGYPETDYGFGPASGQAVPLDDFDFGSYR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctgcgcatcggcctcgcgaccgcggacgacatc
cgtcagtggtcgcacggtgaggtcaagaagcccgagacgatcaactaccgcaccctcaag
ccggagaaggacgggctcttctgcgagaagatcttcggccctcagcgggactgggagtgc
tactgcggcaagtacaagcgggtccggttcaagggcatcatctgtgagcgttgcggcgtc
gaggtgacccgctccaaggtccgtcgtgagcggatggggcacatcgagctggccgctccg
gtgacccacatctggtacttcaagggcgtgccgagccggctgggctacctgctggacctc
gcccccaaggacctcgaaaagatcatctacttcgcctcgtacgtcgtgacgagcgttgac
gccgaggcgcgtcaccgtgacctctcgacgatcgagaacgagatcctcgccgagaagcgg
cagtccgagaacagccgcgactcggagatcgagaagcgggccgccaagctggaggccgac
ctggccgagctggaggccgagggcgccaaggcggacgtccggcgcaaggtcaaggagggc
ggagagcgcgagatgcgccagatccgcgaccgggcccagcgcgagatcgaccgcctcgac
gaggtcctcgacaccttccgcaagctcgactccaagcagctggtcaccgacgagctgctc
taccgcgagctgcgtgaccggttcggcgagtacttcaccggtggcatgggcgccgaggcg
atcaaggcgctggtccagaacatggacctcgacgccgaggccgagagcctgcgcgagacc
atccgctccggcaagggccagcgcaagatccgtgcgctcaagcggctgaaggtcgtcgcg
gcgttcctgaacacccgcaactcgccgctgggcatggtgttggactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgtgtgatcaaccggaacaaccggctcaagcggctgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgtcgcggccggccggtcaccggcccgggtaaccgcccgctcaag
tcgctgtccgacatgctcaagggcaagcagggccggttccggcagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgaagctgaagctgcaccag
tgcggcctgcccaagcagatggcgctggagctgttcaagccgttcgtgatgaagcggctg
gtcgacctcaaccacgcgcagaacatcaagtccgccaagcggatggtcgagcggcagcgc
ccggtcgtgtgggacgtgctggaagaggtcatcggcgagcacccggtgctgctcaaccgc
gcgccgacgctgcaccgcctgggcatccaggccttcgagccgcagctggtcgagggcaag
gcgatccagatccacccgctggtctgcaccgcgttcaacgccgacttcgacggtgaccag
atggcggtgcacgtgccgctgtcggccgaggcccaggccgaggcgcggatcctgatgctg
tcgtcgaacaacatcctcaagccggccgacggcaagccggtcaccatgcccacccaggac
atggtcatcggcctctaccacctcacccacctgaccccgggcggggtcggcgagggccgg
gcgttcagctcggacgctgaggcgcggatggcgttcgacgcgggcgagctgcacctgcag
accccggtcaagatccggctgcgggacgtgatcggtgtcgacaacggcaacggcgcggag
ccctgggtcgccccggagggctgggtcgagggtgagccgctgaccgtggagaccacgctc
ggccgggtcctgttcaacgagacgctgccgcagggctaccgcttcgtgaactacgagatc
cgcaagggccagctctccgcgatcgtcaacgacctcgccgagcgcttccccaaggtggcg
ctggccgccaccctggacgggctcaaggaggccggcttccactgggccacctggtccggc
gtcaccatcggtatggaggacgtcatcgctccgccgcgcaagcgggagatcctggagcgg
tacgagaaggaagccgaccggatcgacaagcagtaccagcgtggtctgatgaccgccgag
gagcgtcgcggcgaactcatcgagatctggaccaaggcgaccaacgaggtcgccaaggag
atggacaccgcgctgccgcaggagaacccgctgtggaagatgatcaactcgggcgcccgc
ggtaacctgctccagctccggcagatcgcggcgatccgtggtctggtggccaacccgaag
ggcgagatcatcccgcgacccatcaaggcgtcgtaccgggagggtctgtccgtgctggag
tacttcatctccacgcacggtgcccgtaagggtctggccgacaccgcgctgcgtaccgcc
gactcgggttacctcacccgtcgtctggtggacgtctcgcaggacgtcatcatccgcgag
gaggactgcggcaccgaccgggcgatcccgatgcagatcggcgagcgtctggagggtggc
cggctggtcgtccacgagcacgccgagaccagcgtgcacgcccgtaccctggccgacgac
atcaaggggccggacggcaccgtggtggcccaccggggtcaggacatcaactccatcggg
gtcgacaagatcgtcgccgccggggtggagacggtccgggtgcgcagcgtgctcacctgc
gagtcgaagctgggcgtctgcggtgcgtgctacggccgttcgctgccgaccggcaagacc
gtggacgtcggcgaggcggtcggcatcatcgccgcccagtcgatcggtgagccgggcacc
cagctgacgatgcgtaccttccacaccggtggtgtcgcgggtgaggacatcacccagggt
ctgccgcgtgtccaggagatcttcgaggcccgtatcccgaagggcaaggcgcccatcgcc
gacaccccgggccggatccggatcgaggacggcgagcggtcccggaagatcatcgtggtg
ccggacgatggcagcgacgagatcgtctacgacaagatctccaagcgggtccggctgcgg
acccacgacggggaccacgtcgaggtcggcgagaagctcaccgagggcaccatcgacccg
cacgagctgctgcgcatcctcggcccgcgcgcggtccaggtccacctgacccaggaggtc
caggaggtctaccgctcgcagggtgtgctcatccacgacaagcacatcgagatcatcatc
cgccagatgctcaagcgggtgacggtcatcgactccggctcgaccgagttcctgccgggt
gtgcttgtcgaccgggcgctgttcgagtcggagaaccgccggctcgtcggcgagggtggc
gagcccgctgccggtcgtccggtgctgatgggtatcaccaaggcctcgctggccaccgac
tcctggctctcggcggcctccttccaggagaccacccgggtgctgaccgacgcggcgatc
aactcgcgcagcgactcgctggtcggcctcaaggagaacgtgatcatcggtaagctcatc
ccggccggtaccggcatcagcaagtaccgcaacgtccgggtcgagccgaccgaggaggcg
aaggccaaggtctactcgatgaccggctacccggagaccgactacggcttcgggccggcc
agcgggcaggcggttccgctggacgacttcgacttcgggtcgtaccgctga
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integrated database retrieval system
