Microbacterium sp. HA-8: AB2L57_00710
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Entry
AB2L57_00710 CDS
T10924
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mici Microbacterium sp. HA-8
Brite
KEGG Orthology (KO) [BR:
mici00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mici03032
]
AB2L57_00710
03400 DNA repair and recombination proteins [BR:
mici03400
]
AB2L57_00710
Enzymes [BR:
mici01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AB2L57_00710
DNA replication proteins [BR:
mici03032
]
Prokaryotic type
DNA Topoisomerases
AB2L57_00710
DNA repair and recombination proteins [BR:
mici03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB2L57_00710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
XLP03664
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All DBs
Position
141091..142053
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AA seq
320 aa
AA seq
DB search
MPRLVRVRPLEDAGITRVRAGSGFRYVDHRGRSAAARDVARIRTLVIPPAWQEVWICRES
RGHIQAVGTDDAGRRQYVYHPDWSANRDRNKYARALALGESLPRARARVTSALRRSALDR
EKVLAVAFRLLDLGAPRVGSARYLAAHGSRGLTTLQRRDVVAEPPRITLSFPGKSGKRAH
IVIDDADLAAVVADLAQGRPRAALLSYRRGRRRVPLSPSDVNAYVRALTGGRFTAKDFRT
LRGTILAAEALARIGTVDTKADRRRAEQLAVRATAEALGNTPAVARSSYIDPRVFRHYAR
GRLLDLDISPESAIRELLGG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcgcctcgtgcgcgtgcgtccactcgaggacgccggcatcacccgtgtgcgcgcg
ggctccggattccgctacgtcgaccacaggggtcggtccgccgccgcccgagacgtcgca
cgcatccggactctcgtcatcccgccagcgtggcaggaggtctggatctgccgtgagtcg
cgtggacacatccaggccgtgggcaccgatgacgccggcaggcgtcagtacgtgtaccac
cccgactggagcgcgaaccgggaccgcaacaagtacgcgcgcgcactggcgctcggcgaa
tcgctgccccgcgcccgcgcccgtgtgacgagcgccctgcgccgctccgcgctcgatcgg
gagaaggtgctcgcggtcgcattccggctgctcgacctcggcgcgccccgggtaggttcg
gcgaggtatctcgccgcccacggaagccgggggctcacgacgctgcagaggcgggatgtc
gtggccgaaccgccgcgcatcaccctgtcgttcccgggcaagagcggcaagcgcgcccac
atcgtgatcgacgacgccgacctcgcggcggtggtggccgacctggcgcaggggcggcca
cgcgccgctctgctgtcgtatcgccgcgggcgccggcgcgtgccgctgagcccttcggac
gtgaacgcgtacgtccgtgccctcacgggcggccggttcactgccaaggacttccggacg
ctgcgcggcacgatcctggccgccgaggcgctggcgcgcatcggcacggtcgacaccaag
gccgaccgcagacgcgccgaacagctcgccgtgcgggcgacggccgaggcgctcggcaac
actcccgccgtcgcgcgctcgagctacatcgatccccgagtgttccgccactacgcacgc
ggacgactgctcgacctcgacatctcgcccgagtcggcgatccgcgagctcctgggcggg
tga
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