Microbacterium sp. HA-8: AB2L57_02735
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Entry
AB2L57_02735 CDS
T10924
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mici Microbacterium sp. HA-8
Pathway
mici03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mici00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB2L57_02735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mici03021
]
AB2L57_02735
03400 DNA repair and recombination proteins [BR:
mici03400
]
AB2L57_02735
Enzymes [BR:
mici01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB2L57_02735
Transcription machinery [BR:
mici03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB2L57_02735
DNA repair and recombination proteins [BR:
mici03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB2L57_02735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
XLP04029
LinkDB
All DBs
Position
573348..577220
Genome browser
AA seq
1290 aa
AA seq
DB search
MLDATTFDELRIGLATADDIRRWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVISVDEDARHADMPQLENELRLELKTLADQRDSRIAARLRKLEEE
LASLEEEGAKADQKKKVKDAAEKEMGQIRKGFDEQITRLERVWEDFRSLKVGDLKPEDDV
FQELQDRFSLYFEAHMGAESIQRRLAAFDLAAEAENLHLQISEGKGQRKIRAIKRLKVVN
SFLSTGMSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERTR
PEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARLLMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVKPGATGEGR
AFGSVSEAILAREEGTLDLQAKVRIRVPGLAFLEGEAPEDYERHGLVEASLGQAIFNDAL
PKGYPFVREQADKGKLSQIVNKLAEEYPAEVAATLDRIKDAGFHWATRSGVTVALSDILT
PPNKAEIVSKYEKDAAKVQDDFDMGFIDDGARRKELIDIWTKATDEVQAAMRENFPVDNT
INRMVSSGARGNWLQIRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYFIATHGTRK
GLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTSKGLEYVIAAPGASGELVKDKNVEN
SVFARTLASDVVDAQGAVLAAAGEDVGDVLIEKLFQAGVESIKVRSVLTCDSAVGVCAKC
YGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELFE
ARTPKGASPIAEAAGRVTIDETDKSKKIIITPDNGDEPTVYPVLKRATLLVEDGQHVEVG
EALQVGTRDPKDIMRVQGAREVQKYLVGGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTVV
DHGDTTLLPGELVDSRRFIDINRQTVAEGKRPASGRPELMGITKASLATESWLSAASFQE
TTRVLTEAAMQGKSDPLVGLKENVIIGKLIPAGTGLGKYRNVVVEATEEAKSERYPNRVF
ASDGVYSEADLGFVDFDSFSTDDFTPGTYN
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgcaacaacattcgatgagcttcgcatcggcctcgcgaccgccgacgacatc
cgtcgctggtcctacggtgaggtcaagaagcccgagaccatcaactaccgcaccctcaag
cccgagaaggacggcctcttcggagagcagatcttcggacccagccgtgactgggagtgc
gcgtgcggcaagtacaagcgcgtgcgcttcaagggcatcgtctgcgagcgctgcggcgtg
gaggtcaccaagtcctccgtccgtcgcgagcgcatgggccacatcgagctcgcggcgccc
gtcacccacatctggtacttcaagggcgtgccctcgcgcctgggctacctgctggacatg
gcgccgaaggacctcgagaaggtcatctacttcgccgcgtacatggtcatctcggtcgac
gaggacgcccgtcacgccgacatgccccagctcgagaacgagctgcgtctcgagctgaag
acgctcgccgatcagcgtgactcgcgcatcgcggcccgcctgcgcaagctggaggaggag
ctcgcctcgctcgaggaggagggcgccaaggccgaccagaagaagaaggtcaaggacgcc
gccgagaaggagatggggcagatccgcaagggcttcgacgagcagatcactcgtctggag
cgcgtgtgggaggacttccgcagcctcaaggtcggcgacctcaagcccgaggacgacgtc
ttccaggagctgcaggaccgcttcagcctctacttcgaggcgcacatgggcgccgagtcg
atccagcgccgcctcgccgccttcgacctggccgccgaggccgagaacctgcacctgcag
atctccgagggcaagggccagcgcaagatccgcgccatcaagcgactcaaggtcgtcaac
tccttcctctcgacgggcatgagccccgccgcgatggttctcgatgtcgtgccggtgatc
ccgccggagctgcgcccgatggtgcagctcgacggtggccgcttcgccacctccgacctc
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgcctgcgtcgtctcatcgatctc
ggcgcccccgagatcatcgtgaacaacgagaagcggatgctgcaggaggccgtcgatgct
ctgttcgacaacggccgccgcggtcgtcccgtcacgggcaccggcaaccgcgcgctgaag
tcgctctccgacatgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtggactactcgggccgttcggtcatcgtcgtcggtccccagctcaagctgcaccag
tgcggcctgcccaagcagatggctctcgagctgttcaagccgttcgtcatcaagcgcctg
atcgatctcggtcactcgcagaacatcaaggccgccaagcgcgccgtcgagcgcactcgt
cccgaggtctgggacgtgctcgaggagatcatccgcgagcggcccgtgctgctcaaccgt
gcgcccacgctccaccgtctgggtatccaggcgttcgagccgcagctcgtggagggcaag
gcgatccagctgcacccgctcgtgtgcgccgcgttcaacgcggacttcgacggcgaccag
atggccgtccacctgcccctgtcggtcgaggctcaggccgaggcgcgtctgctcatgctg
gcctcgaacaacatcctgaagccctccgacggtcgccccgtcaccctgccctcgcaggac
atgatcatcggtctgcaccacctgaccacggtcaagccgggcgccaccggtgagggacgc
gcattcggctcggtctcggaggcgatcctcgcccgcgaggagggcacgctcgatctgcag
gccaaggtgcgcatccgcgtcccgggtctggccttcctcgagggcgaagcccccgaggac
tacgagcgccacggcctcgtcgaggcatccctgggccaggcgatcttcaacgacgccctg
cccaagggatacccgttcgtgcgcgagcaggccgacaagggcaagctgtcgcagatcgtc
aacaagctcgccgaggagtacccggccgaggtcgccgcgaccctcgaccgcatcaaggac
gccggcttccactgggccacgcgctcgggtgtcacggtcgccctctccgacatcctgacc
ccgccgaacaaggcggagatcgtctcgaagtacgagaaggacgccgcgaaggtccaggac
gacttcgacatgggcttcatcgacgacggtgcgcgccgcaaggagctcatcgacatctgg
acgaaggccaccgacgaggtccaggccgcgatgcgggagaacttcccggtcgacaacacc
atcaaccgcatggtgtcctcgggtgctcgcggtaactggctgcagatccgcaacatcgcg
ggtatgcgcggtctcgtgaacaaccccaagggtgagatcatcccccgtccgatcatctcc
tcgtaccgcgagggtctgtcggtggcggagtacttcatcgcgacgcacggtacccgcaag
ggtctcgccgacaccgccctgcgcaccgccgactcgggttacctgacccgtcgtctggtg
gatgtctcgcaggacgtcatcatccgcgaagaagactgcggcacgtcgaagggtctcgag
tacgtcatcgcggccccgggggcttcgggcgagctcgtcaaggacaagaacgtcgagaac
tcggtgttcgcccgcactctcgcctcggatgtcgtcgacgcccagggcgcggtgctcgcg
gccgccggtgaggacgtcggagacgtgctcatcgagaagctgttccaggcgggtgtcgag
tccatcaaggtgcgctcggtcctcacctgcgactcggcggtcggcgtctgcgccaagtgc
tacggccgttcgctcgcgacgggcaagctcgtcgacatcggcgaggccgtcggcatcatc
gcggcccagtcgatcggcgaacccggcacgcagctgacgatgcgcaccttccacacgggc
ggttccgcgtcggcagacgacatcacgcagggtctgccccgtgtgcaggaactgttcgag
gcccgcacgcccaagggcgcgtctcccatcgcggaggcggcgggtcgcgtgacgatcgac
gagaccgacaagtcgaagaagatcatcatcacgcccgacaacggcgacgagcccaccgtg
tacccggtgctcaagcgcgcgacgctgctcgtcgaggacggccagcacgtcgaggtcggc
gaggcgctgcaggtgggtacccgcgacccgaaggacatcatgcgcgtgcagggtgcccgc
gaggtgcagaagtacctcgtcggcggcgtgcagggtgtctaccgctcgcagggtgtgccg
atccacgacaagcacatcgaggtcatcgtccgccagatgctccgcaaggtcaccgtggtc
gaccacggcgacacgacgctgctgcccggtgagctcgtcgactcgcgtcgcttcatcgac
atcaaccgccagacggtcgccgagggcaagcgtccggcgtcgggtcgccctgagctgatg
ggtatcacgaaggcgtcgctcgcgaccgagtcgtggctctcggccgcctccttccaggag
acgacccgcgtgctcaccgaggccgcgatgcagggcaagagcgacccgctcgtcggtctc
aaggagaacgtcatcatcggaaagctcatcccggcgggtaccggcctcggcaagtaccgc
aacgtcgtggtggaggcgaccgaagaggccaagagcgagcgctacccgaaccgcgtgttc
gcgtcggacggcgtctactcggaggccgatctcgggttcgtcgacttcgacagcttctcg
acggacgacttcacgcccggcacgtacaactga
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integrated database retrieval system
