Microbacterium sp. HA-8: AB2L57_04795
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Entry
AB2L57_04795 CDS
T10924
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mici Microbacterium sp. HA-8
Pathway
mici03420
Nucleotide excision repair
mici03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mici00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB2L57_04795
03430 Mismatch repair
AB2L57_04795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mici03400
]
AB2L57_04795
Enzymes [BR:
mici01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB2L57_04795
DNA repair and recombination proteins [BR:
mici03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB2L57_04795
MMR (mismatch excision repair)
Other MMR factors
AB2L57_04795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_30
AAA_11
EcoR124_C
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XLP04415
LinkDB
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Position
1003866..1006367
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AA seq
833 aa
AA seq
DB search
MTDASTPLVVGSDRGPRDSAGATASPPDDDLLAGLNPPQREAVEYRGEALLIVAGAGSGK
TSVLTRRIALLLRRREAWPSQILAITFTNKAAAEMRERVHALVGDVSRGMWISTFHSACV
RILRREAENFGFTASFTIYDSGDSRALVKRLVKEHEADRYGLTPAAVQGKISKLKNELAD
AESYARTANMSDPAERVFVEVFADYQRALTRANAFDFDDLIAQTVYLFRAFPTIADTYRR
RFRHILVDEYQDTNHAQYALIHELTRAPGSGAEPEGFDGGGGMMIFEPAARRDEPDQAAA
SLTVVGDSDQSIYAFRGADIRNISEFERDYPGAKVVLLEQNYRSTQNILSAANAVISHNF
DRKDKKLWTDVGAGDAIIGFTGYSQHDEAQFVADEIEALHRRGTAYGDIAVFYRTNSQSR
ALEEIFIRSALPYKIMGGTKFYERAEIKDAMAYLIAVANPADEMALRRILNRPRRGIGDV
TQATIARYAADEGITFRDALANASALGVGPKIQAAVAQLDAVLVEASAVMLPPSGELAPA
TSVAEGLAILLNKSGYMDALRASRDPQDEARLENLDELISVTKEFARNNPEGTVIDFLAE
VALVSDADDLDDASGSVSLMTMHTAKGLEFDAVFVTGVEEDLIPHRISANEPGGPAEERR
LFYVGITRARKKLHLSLAMTRAQFGEVTVAMPSRFLQEIPADLIDWRQSPGDVNSRGGMQ
SRALNARRPGGSGGASNWGARALPEGASAGRRYGDDLVPKASSIDRFPNRVPARVRDNGD
LELASGDRIRHEDFGEGRVDAVTGEGAKRVAHVRFDSAGPKKLLIKIAPIEKL
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgcctccacgcccctcgtcgtcggcagcgatcgcggaccccgcgactctgcc
ggtgcgacagcatccccacccgacgacgacctgctcgcgggtctgaacccgccccagcgc
gaggccgtggagtatcgcggcgaggccctgctgatcgtggccggagcggggtcgggcaag
acgagcgtgctcacccggcgcatcgcgctgctgctgcgccggcgcgaggcgtggccgagc
cagatcctcgcgatcacgttcaccaacaaggccgcggccgagatgcgtgagcgcgtgcac
gccctcgtcggcgacgtgtcgcgcggcatgtggatctcgacgttccactccgcctgtgtg
cggatcctgcggcgcgaggccgagaacttcggtttcacggcgtcgttcacgatctacgac
tccggcgactcgcgggcgctcgtcaagcgcctggtcaaggagcacgaggccgaccgctac
ggcctgacccccgcggcggtgcagggcaagatctccaagctcaagaacgagctcgccgac
gccgagtcgtacgcgcgcacggccaacatgtccgatcccgccgagcgcgtcttcgtcgag
gtcttcgccgactaccagcgcgcgctcaccagggccaacgcgttcgacttcgacgacctc
atcgcccagacggtctatctcttccgcgcgttcccgaccatcgccgacacctaccgccgt
cgattccggcacatcctggtcgacgagtaccaggacaccaatcacgcgcagtacgccctc
atccacgagctgacccgcgcgccgggttccggcgccgagcccgaggggttcgacggcggc
gggggcatgatgatcttcgagccggccgcacggcgcgacgaacccgaccaggcggcagca
tccctcaccgtcgtcggcgactccgaccagtcgatatacgccttccgcggggccgacatc
cgcaacatcagcgagttcgaacgcgactacccgggcgccaaggtcgtgctgctcgaacag
aactaccgctcgacgcagaacatcctcagcgctgccaacgcggtgatcagccacaacttc
gatcgcaaagacaagaagctctggaccgatgtgggtgcgggcgacgcgatcatcggcttc
accggctactcgcagcacgacgaggcgcagttcgtcgccgacgagatcgaggcgctgcac
cggcggggcacggcctacggcgacatcgcggtgttctatcgcaccaactcgcagtcgcgc
gcgctcgaagagatcttcatccgctctgcgcttccgtacaagatcatgggcggcaccaag
ttctacgagcgtgccgagatcaaggacgcgatggcctacctcatcgcggtcgccaacccc
gccgacgagatggccctgcggcgcatcctgaacaggccgcgacgcggcatcggcgatgtc
acgcaggcgacgatcgcccggtacgccgccgatgagggcatcacgttccgcgacgcgctg
gccaacgcgtcggcgctgggcgtcgggcccaagatccaggccgcggtcgcgcagctcgac
gcggtgctggtcgaggcgtccgccgtcatgctcccgccctcgggtgagctggcgccggcg
acctcggtggccgaagggctcgcgatcctcctgaacaagagcggatacatggacgcgctg
cgtgcgagccgcgacccgcaggacgaggcgcgcctcgagaacctcgacgagctgatctcg
gtgaccaaggagttcgcccgcaacaaccccgagggcacggtgatcgacttcctcgccgag
gtcgcgctcgtctcggacgccgacgacctcgacgatgcctccggatcggtctcgctcatg
acgatgcacaccgcgaaggggctcgagttcgacgcggtgttcgtcacgggtgtcgaggag
gatctgatcccgcaccgcatctcggcgaacgagccgggcggcccggccgaggagcgacgc
ctgttctacgtcggcatcacccgcgcccgcaagaagctgcacctctcgctcgcgatgacc
cgggcgcagttcggcgaggtcaccgtcgcgatgcccagtcgttttctgcaggagatcccc
gccgacctcatcgactggcgtcagtcgcccggcgatgtcaactcccgcggcggcatgcag
tcgcgcgcgctcaacgccaggcgccccggggggtccggcggtgcgtccaactggggcgcg
cgtgccctgcccgagggggcgtcggcgggccgccgctacggcgacgacctcgtgccgaag
gcctcctcgatcgatcgattccccaaccgcgtgcccgctcgcgtgcgcgacaacggtgac
ctcgagctcgcctcgggcgaccgcatccgtcacgaggacttcggcgaggggcgtgtcgat
gccgtcacgggagagggcgccaagcgggtcgcgcacgtgcgattcgacagcgccgggccc
aagaaactgctgatcaagatcgcgcccatcgagaagctgtag
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