Microbacterium sp. HA-8: AB2L57_07130
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Entry
AB2L57_07130 CDS
T10924
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
mici Microbacterium sp. HA-8
Pathway
mici00260
Glycine, serine and threonine metabolism
mici00630
Glyoxylate and dicarboxylate metabolism
mici00670
One carbon pool by folate
mici00785
Lipoic acid metabolism
mici01100
Metabolic pathways
mici01110
Biosynthesis of secondary metabolites
mici01200
Carbon metabolism
Module
mici_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
mici00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AB2L57_07130 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AB2L57_07130 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AB2L57_07130 (gcvP)
00670 One carbon pool by folate
AB2L57_07130 (gcvP)
Enzymes [BR:
mici01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
AB2L57_07130 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
HTH_31
Motif
Other DBs
NCBI-ProteinID:
XLP04842
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Position
1489595..1492462
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AA seq
955 aa
AA seq
DB search
MSGDAFSARHIGIDAAAQRRMLDAVGHADVDSLVDAAVPAAIHARPRATSDIPRAATEAE
ALAELRAFASANRAARPMIGLGYYDTLTPAVITRNVLENPSWYTAYTPYQPEISQGRLEA
LINFQTMVTDLTGLATAGASMLDEPTAVVEGMLVARRSSKAASNVFVVDADALPQTKAVL
RGRAEAVGIDIVEVDLAHGGMLPDALFGVFVQYPGASGRVWDPSAVIDAAHLAGGLAVVA
ADLLALTLLASPASLGADIAAGTTQRFGVPLGFGGPHAGYLAVRQGLERQLPGRLVGVSQ
DAAGHPAYRLSLQTREQHIRREKATSNICTAQVLLAVMAAMYAVYHGPDGLHRIATSIAR
RADALARTLRAYDLPLVAESFFDTIRVVVPSSADRVIERARSRGYQLLRVDDAIVGVSID
ETTTDEDLAHVAWAFGLPDDHEFSVDGAHALSGAPTSIRRTDSYLQHPVFNTHRSETSMM
RYLKQLADRDYALDRGMIPLGSCTMKLNAATEMAAVSWPEFARVHPFAPASDVVGYLGLI
EQLETWLAEVTGYDAVSLQPNAGSQGELAGLLAIRGWHRSRGEEGRDVCLIPSSAHGTNA
ASAVLAGMRVVVVACDEAGNVDLDDLRAKISAHAETLAALMITYPSTHGVYEHDVLEITQ
AVHDAGGQVYIDGANLNALLGYARFGDLGGDVSHLNLHKTFAIPHGGGGPGVGPVAAKAH
LAPFLPAHPFAQRADHAGGFVFEGAPVAGAGYGSAGILPISWAYVRMMGADGLREATATA
VLSANYIAVRLRDHFPVLYTGEGGLVAHECILDLRPLRERTGITVDDVAKRLIDYGFHAP
TMSFPVAGTLMVEPTESEDLAELDRFCDAMIAIHTEALRVAAGEWPADDNPLVNAPHTAE
TIAAAEWQHPYSREEAVYPVRSLVRTKYWPPVRRIDNAYGDRNLVCACPPIEAFA
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggcgacgcattctcggcgcggcatatagggatcgacgccgccgcgcaacgccgc
atgctcgacgccgtggggcatgccgacgtcgattccctcgtcgatgcggcggtgcccgcc
gctatccatgcccgcccgcgggccacgagcgacatcccgcgggctgcgaccgaggccgag
gcgctcgccgagctgcgcgcgttcgcctcggcgaacagggccgcgcggccgatgatcggc
ctcggctactacgacacgctcacaccggcggtcatcacgaggaacgtcctcgagaacccg
tcctggtacaccgcctacacgccctaccagcccgagatctcccaggggcgcctcgaggcg
ctgatcaacttccaaaccatggtgaccgatctcacggggctcgcgaccgccggcgcgtcg
atgctcgacgagcccaccgccgtcgtcgaggggatgctggtggcccggcgctcgtccaag
gccgcctcgaacgtgttcgtggtcgacgccgacgcgctgccgcagacgaaggccgtgctg
cgcgggcgggccgaggcggtcggcatcgacatcgtcgaagtcgacctcgcgcacgggggg
atgctgcccgacgcgctcttcggcgtgttcgtgcagtacccgggagcgtccggccgggtg
tgggatccgtcggccgtcatcgacgccgcgcacctcgcgggcggcctcgccgtcgtcgcc
gccgatctgctcgcgctgaccctgctcgcctcgcccgcgtcgctgggcgccgacatcgcc
gccggcacgacacagcgcttcggtgtgccgctgggcttcggcggcccccacgccggctac
ctcgccgtgcgccaggggctcgagcggcagctgccgggccgtctcgtcggcgtgtcgcag
gacgccgcgggtcacccggcgtaccggctgtcgctgcagacccgcgagcagcacatccga
cgcgagaaggcgacctccaacatctgcacggcgcaggtgctgctggccgtcatggcggcg
atgtacgccgtataccacgggcccgacgggctgcaccggatcgcgacatccatcgcccgc
cgcgcggacgcgctggcgcgcaccctgcgcgcgtacgatctgccgctcgtggcggagtcg
ttcttcgacacgatccgcgtggtggtgccgagctcggccgaccgggtgatcgagcgggcg
cgctcgcgggggtaccagctgctgcgggtcgacgacgcgatcgtcggcgtctcgatcgat
gagacgaccaccgacgaggacctcgcgcacgtcgcgtgggcgttcggtctgcccgatgac
cacgagttctccgtcgacggggcgcatgcgctctcgggcgcaccgacgtcgatccgccgc
acggactcctatctgcagcatcccgtgttcaacacccaccgcagcgagacgtcgatgatg
cgctacctcaagcagctcgccgatcgggactacgcgctggaccgcgggatgatcccgctc
gggtcgtgcacgatgaagctgaatgcggccaccgagatggcggcggtgtcgtggccggag
ttcgcgcgggtgcatcccttcgctccggcgtcggatgtcgtggggtacctcgggctgatc
gagcagctcgagacgtggctggccgaggtgaccgggtacgacgcggtgtcgctgcagccc
aacgccggatctcagggtgagctcgcggggttgctcgcgatccgcggctggcaccggtcg
cgaggcgaggaggggcgcgatgtctgtctgatcccgtcttctgcgcacggcacgaacgcc
gcctcggcggtgctggcgggcatgcgcgtcgtcgtcgtcgcgtgcgacgaggccggaaac
gtcgatctcgacgacctgcgtgccaagatctcggcgcacgccgagacgctcgcggcgctc
atgatcacctacccctcgacgcacggcgtgtacgagcacgacgtgctcgagatcacccag
gccgtccacgacgcgggcggacaggtctacatcgacggcgccaacctcaacgccctgctg
gggtatgcgagattcggcgatctcggcggcgacgtgtcgcacctgaacctgcacaagacc
ttcgcgatcccgcacggcgggggcgggccgggggtcggtcccgtcgcggcgaaggcgcac
ctggccccgttcctgccggcccacccgttcgcgcagcgcgccgaccacgccggcgggttc
gtgttcgagggcgcgccggtggcgggggcggggtacggttctgccggcatcctgccgatc
tcgtgggcgtacgtgcgcatgatgggggcggacggcctccgcgaggcgacggccaccgcc
gtgctctcggccaattacatcgcggtgcggctgcgcgaccacttcccggtgctgtacacg
ggtgagggcgggctcgtcgcgcacgagtgcatcctcgatctgcgtccgctgcgcgagcgg
acgggcatcacggtcgacgatgtcgccaagcgcctgatcgactacggcttccacgccccg
acgatgtccttccccgtcgccggcacgctgatggtcgagccgaccgagtcggaggacctc
gcggagctcgaccgcttctgcgacgcgatgatcgcgatccacaccgaggcgctgagggtc
gcggcgggggagtggccggccgatgacaaccccctggtgaacgcgccgcacacggccgag
acgatcgcggcggccgaatggcagcatccgtattcgcgagaggaggccgtgtacccggtg
cgctcactcgtgcgcacgaagtactggccgccggtgcgccgcatcgacaacgcctacggc
gaccgcaacctcgtgtgcgcctgcccgccgatcgaggccttcgcctga
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