Microbacterium sp. HA-8: AB2L57_08530
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Entry
AB2L57_08530 CDS
T10924
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mici Microbacterium sp. HA-8
Pathway
mici03030
DNA replication
mici03430
Mismatch repair
mici03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mici00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB2L57_08530 (dnaE)
03430 Mismatch repair
AB2L57_08530 (dnaE)
03440 Homologous recombination
AB2L57_08530 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mici03032
]
AB2L57_08530 (dnaE)
03400 DNA repair and recombination proteins [BR:
mici03400
]
AB2L57_08530 (dnaE)
Enzymes [BR:
mici01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB2L57_08530 (dnaE)
DNA replication proteins [BR:
mici03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB2L57_08530 (dnaE)
DNA repair and recombination proteins [BR:
mici03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB2L57_08530 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XLP05100
LinkDB
All DBs
Position
1791780..1795295
Genome browser
AA seq
1171 aa
AA seq
DB search
MAADSFVHLHVHSEYSMLDGAARIGPLVQEAARQGMPAIAVTDHGNTFGAFEFYKAAKDA
GIKPIVGIEAYVTPGTHRSDKARVRWGGPDQSDDDVSGSGAYTHMTLLSQSTEGMHNLFR
LSSRSSLEGYYFKPRMDRELLQTYSKGLIATTGCPSGEVQTRLRLGQYDAARAAAAEFQD
LFGKENYFAEIMDHGLSIERRVMSDLLRISKDLSIPLLATNDLHYTHQHDSTSHAALLCV
QSGSTLDDPKRFKFDGDGYYVKTPAEMRQIFRDHPEACDNTLLVAERCEVEFNTSANFMP
RYPVPDGETEQSWFVKEVEKGLQYRYPGGIPAEVRAQAEYETDVIVQMGFPGYFLVVADF
INWAKNNGIRVGPGRGSGAGSMAAYAMRITDLDPLQHGLIFERFLNPDRVSMPDFDVDFD
DRRRGEVIQYVTEKYGDDRVAQIVTYGTIKAKQALKDASRVLGFPFGMGEKLTKAMPPAV
MGKDMPLDGMFNPQHPRYKEASEFRTLIETDPESKTVFDTAIGLENLKRQWGVHAAGVIM
SSEPLLDIIPIMKREQDGQIVTQFDYPSCEALGLIKMDFLGLRNLTIIDDALDNIRANRG
EDVVLEDLTLDDPAAYELLTRGDTLGVFQLDGGPMRSLLRLLKPDNFEDISAVIALYRPG
PMGANSHTNYALRKNGLQEITPIHPELEEPLAEILSTSYGLIIYQEQVMAIAQKVAGFSL
GQADILRRAMGKKKKSELDKQYEGFQAGMHANGYSDAAVQMLWDILLPFSDYAFNKAHSA
AYGLVSYWTAYLKAHYPAEYMAALLTSVGDSKDKLAVYLNECRRMGIRVLPPDVSESIRY
FAAVEDDIRFGLGAIRNVGANVVDAIVQVRGEGGFDSFHGFLEKVPMQVANKRTIESLIK
AGAFDSTGSTRRALLEIHENAIDQVVDVKRNEANGQYGFDFDSLLEESEKAVAKVPDRPE
WTKKDKLAFEREMLGLYVSDHPLAGLEVPLAKHASTSIHDLLSSDDLNDGDQVTVAGLLT
SVQHRVAKSSGNPYGMITVEDFNGEVTVMFMGKTYQEFQPLLQPDAILAVRGRVSRRDDG
MNLHAVSAMVPDLGSVDASGGLDLIVPERRATEAVISELADVLSRHRGPSEVRLKLTKGQ
VAKVFEVPYPVTVSADLYGELKSLLGPGCLG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtggccgccgactccttcgttcatctgcatgtccacagcgagtactcgatgctcgacggc
gccgcgcgcatcggcccgctcgtccaggaggcggcccgtcagggcatgccggcgatcgcc
gtcaccgaccacggcaacacgttcggcgcgttcgagttctacaaggcggccaaggacgcg
ggcatcaagccgatcgtcggcatcgaggcgtacgtcacgcccggcacgcaccgcagcgac
aaggcccgcgtgcgctggggcggccccgaccagagcgacgacgacgtgtcgggctcgggc
gcctacacacacatgaccctgctgtcgcagtcgaccgagggcatgcacaatctcttccgg
ctgtcctcgcgctccagcctcgagggctactacttcaagccgcgcatggaccgcgagctg
ctgcagacctactccaagggtctgatcgcgacgacgggttgcccgtcgggcgaggtgcag
acgcgcctgcgcctcggccagtacgacgcggcccgcgccgccgcggccgagttccaggac
ctgttcggcaaagagaactacttcgccgagatcatggatcatgggctcagcatcgagcgc
cgcgtgatgagcgacctgctgcgcatctcgaaagacctcagcatcccgctgctggccacg
aacgatctgcactacacacatcagcacgactcgaccagccacgccgccctgctctgcgtc
cagtccggctcgaccctcgacgatccgaagcggttcaagttcgacggcgacggctactac
gtcaagacgccggccgagatgcgtcagatcttccgcgatcaccccgaggcctgcgacaac
acgctgctcgtcgccgagcggtgcgaggtcgagttcaacacgagcgccaacttcatgccg
cgctatccggtgccggacggcgagaccgagcagtcctggttcgtcaaagaggtcgagaag
gggctgcagtaccgctatcccggcggcatccccgccgaggtgcgcgcacaggccgagtac
gagaccgacgtcatcgtgcagatgggctttcccggatacttcctcgtcgtggcggacttc
atcaactgggcgaagaacaacggcatccgcgtgggcccggggcgcggctcgggcgcgggc
tcgatggcggcgtacgcgatgcgcatcaccgatctcgacccccttcagcacggcctcatc
ttcgagcgcttcctcaaccccgaccgcgtctcgatgcccgacttcgacgtcgacttcgac
gaccggcgccgcggcgaggtcatccagtacgtcaccgagaagtacggcgacgaccgtgtg
gcgcagatcgtcacctacggcaccatcaaggccaagcaggcgctgaaggacgccagccgc
gtgctcggattccccttcggcatgggtgagaagctcaccaaggcgatgccgccggccgtc
atgggcaaggacatgccgctggacggcatgttcaacccccagcatccccggtacaaggag
gcgtccgagttccgcacgctcatcgagaccgaccccgagtcgaagacggttttcgatacg
gcgatcgggctcgagaacctcaagcggcagtggggtgtgcacgccgccggcgtgatcatg
tcgagcgagcccctgctcgacatcatcccgatcatgaagcgcgagcaggacggccagatc
gtcacgcagttcgattacccctcctgcgaggcgctcggactcatcaagatggacttcctg
gggttgcgaaacctcacgatcatcgacgacgccctcgacaacatcagggcgaaccgcggt
gaggacgtcgtcctcgaagacctcaccctcgacgatcccgcggcgtacgaactgctcacc
cgcggagacacgctcggcgtcttccagctcgatggcgggcccatgcgcagcctcctgcgg
ctgctcaagcccgacaacttcgaagacatctcggccgtcatcgcgctctaccgaccgggg
cccatgggtgccaactcgcacaccaactacgctctgcgcaagaacggcctgcaagagatc
acgccgatccatcccgagctcgaggagccgctcgccgagatcctcagcaccagctacggc
ctgatcatctatcaggagcaggtcatggcgatcgcgcagaaagtcgccggcttcagcctc
ggacaggccgacatcctgcgccgcgcaatgggcaagaagaagaagtccgagctcgacaag
cagtacgagggcttccaggcgggcatgcacgcgaacggctattcggatgctgccgtgcag
atgctgtgggacatcctgctgcccttctcggactacgccttcaacaaggcccactccgcc
gcctacgggctcgtgtcgtattggaccgcgtacctcaaggcgcactatcccgccgagtac
atggcggctctgctgacgagcgtgggcgattccaaggacaagctcgcggtctacctcaac
gagtgccgacgcatggggatccgcgtgctgccgcccgatgtcagcgagtcgatccgctac
ttcgcggccgtcgaggacgacatccgcttcggactcggcgcgatccgaaacgtcggtgcg
aacgtcgtcgacgccatcgtccaggtgcgcggcgagggcgggttcgactccttccacggc
ttcctcgagaaggtgccgatgcaggtggccaacaagcgcacgatcgagtcgctgatcaag
gccggcgccttcgactcgaccgggtcgacacggcgcgccctgctggagatccacgagaac
gcgatcgatcaggtcgtcgacgtcaaacgcaacgaggcgaacgggcagtacggcttcgac
ttcgacagcctcctggaggagtccgagaaggccgtggccaaggtgcccgaccgccccgag
tggaccaagaaggacaagctcgcgttcgagcgcgagatgctcgggctctacgtgtccgat
catccgctcgcagggctcgaggttccgctggccaaacacgcctccacgtccatccacgac
ctgctctcctccgacgacctcaacgacggcgaccaggtcacggtcgcggggctgctcacg
agcgtccagcaccgcgtcgccaaatccagcgggaatccctacggcatgatcaccgtcgag
gatttcaacggcgaggtgaccgtgatgttcatgggcaagacgtatcaggagttccagccg
ctcctgcagcccgatgcgatcctcgccgtgcgtggtcgtgtctcgcgccgcgatgacggc
atgaacctgcacgcggtgtccgcgatggtgcccgatctgggttcggtcgatgcatcgggc
ggactcgacctgatcgttcccgagcgtcgtgccaccgaagcggtcatctcggagctcgcc
gacgtgctcagccgccaccgtggtccgtccgaagtgcggctgaagctgacgaagggccag
gtcgcgaaggttttcgaggtgccgtacccggtcacggtctcggctgatctgtatggcgaa
ctgaagtcgctgctcgggcccggctgcctcggctga
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