Microbacterium sp. HA-8: AB2L57_12870
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Entry
AB2L57_12870 CDS
T10924
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mici Microbacterium sp. HA-8
Pathway
mici03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mici00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AB2L57_12870 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mici03021
]
AB2L57_12870 (rho)
03019 Messenger RNA biogenesis [BR:
mici03019
]
AB2L57_12870 (rho)
Transcription machinery [BR:
mici03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AB2L57_12870 (rho)
Messenger RNA biogenesis [BR:
mici03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AB2L57_12870 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
IF2_N
AAA_25
NACHT
Spore_III_AA
AAA_22
Glyco_tranf_2_3
Motif
Other DBs
NCBI-ProteinID:
XLP02619
LinkDB
All DBs
Position
complement(2694831..2696984)
Genome browser
AA seq
717 aa
AA seq
DB search
MESISEIQAGTTSPEGENTGDSAPAEAHPNDGADTSAPVTETAPVEPAEQPAAAEASVES
AEQPAAEAAPTEQSAADAAPADEATPTEAVEQAAPTRAARKSPRRRRVREIAAEAGVDAK
RIIAVASELGATLKTSQSAVDADLDARITAALAAQATEGDATEGSVADAVAPVDATGDQA
DPATDAAQGATEQSTASDAAPASTDTTAQNPEGSREQSDGENDGGDQPTGRRSRNRNRNR
NRGGQNGAAAQGGQNGQNQGGQNAQNQGGQNAPAAQPAGAAQNAPQNQAASDDDGQQGGR
GRGRARGKRTGAPVDEFETEISDDDVLIPIAGILDVLDNYAFVRTTGYLPGPSDVYVSLG
QVKKYNLRKGDAVVGAIKQPREGEQSGRQKYNALVKVDAINGLSADDAANRVEFGKLTPL
YPQERLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIASAIAQNNPEV
HLMVVLVDERPEEVTDMQRTVRGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVV
LLDSITRLGRAYNISAPTSGRVLSGGVDASALYPPKRFFGAARNIENGGSLTILATALVE
TGSKMDEVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSNDEVKITWK
LRRALAGLDPQQALEVVLGKLKETSSNVEFLVQMQKSIPAPAQGAHGHSHGHDNNIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccatctccgagatccaggccggtaccacttcgcccgagggcgagaacaccggt
gacagcgcgcccgctgaggcgcaccccaacgacggcgccgacacatcggcgcccgtgacc
gagacggcgccggtcgaaccggccgagcagcccgccgctgccgaggcgtcggtcgagtcg
gccgagcagcccgccgccgaggcggcgccgaccgagcagtccgctgccgacgcggcgccg
gccgacgaggccacgccgaccgaggcggtcgagcaggccgcacccacgcgtgccgcacgc
aagtcccctcgccgccgtcgcgtgcgtgagatcgccgccgaggccggtgtcgatgccaag
cgcatcatcgccgtcgcgagcgagctcggcgcgacactcaagacgtcgcagtccgcggtc
gacgccgatctcgacgcccgcatcacggccgcactcgcggcgcaggccaccgagggtgac
gcgaccgagggatcggtggctgacgccgtcgctccggtcgacgcgaccggtgaccaggcc
gatccggccaccgacgccgcccagggcgcaacggagcagtccaccgcgagcgatgcggct
ccggcatccaccgacacgaccgcgcagaaccccgagggctcgcgcgagcagtccgacggc
gagaacgacggtggcgatcagcccaccgggcgtcgcagccgcaaccgcaaccgcaaccgc
aaccgcggcgggcagaacggcgctgccgcccagggcggccagaacggccagaaccagggc
gggcagaacgcccagaaccagggcgggcagaacgcgccggccgcgcagcccgcgggggcg
gcgcagaacgcaccccagaaccaggccgcgtcggacgacgacggtcagcagggcgggcgt
ggccgcggacgcgcgcgcggcaagcgcaccggagcgcccgtcgacgagttcgagaccgag
atcagcgacgacgatgtgctcatccccatcgccggaatcctcgacgtcctcgacaactat
gccttcgtgcgcacgaccggctacctgccgggtccgagcgacgtctacgtctcgctcggt
caggtcaagaagtacaacctgcgcaagggcgacgccgtcgtgggcgcgatcaagcagccc
cgcgagggcgagcagtcggggcgccagaagtacaacgcgctggtcaaggtcgacgcgatc
aacgggctgtccgccgacgacgcggcgaaccgcgtcgagttcggcaagctcactccgctc
tacccccaggagcgactgcgcctcgagaccgcgcccgagaagctgacccagcgcatcatc
gatctcgtcgcgccgatcggcaagggccagcgcggactcatcgtcgcgcccccgaaggcg
ggcaagacgatcgtcctgcagcagatcgcgagcgcgatcgcgcagaacaaccccgaggtg
cacctcatggtggtgctggtcgatgagcgccccgaagaggtcaccgacatgcagcgcacg
gtgcgcggcgaggtcatcgcctccaccttcgaccgtcccgccgaagaccacaccaccgtc
gccgaactcgcgatcgagcgcgccaagcgcctggtcgaactcggccgcgacgtcgttgtg
ctcctggattcgatcacgcggctcggccgcgcgtacaacatctccgccccgacctcgggc
cgcgtgctcagcggcggcgtcgacgcctcggcgctctacccgcccaagcgcttcttcggt
gccgcgcgcaacatcgagaacggcggatcgctcacgatcctcgcgaccgcgctcgtggag
accggttccaagatggacgaggtcatcttcgaggagttcaagggcaccggcaacagcgag
ctgcgcctgtcgcgccagctcgccgacaagcggattttcccggccgtcgacgtgaacgcg
tcctcgacacgtcgcgaggagatgctcctctcgaacgacgaggtgaagatcacctggaag
ctgcgccgggcactcgccggcctcgacccgcagcaggcgctggaggtcgtgctcggcaag
ctcaaggagacctcctccaacgtggagttcctcgtgcagatgcagaagtcgatcccggcg
cccgcgcagggcgcgcacggccacagccacgggcacgacaacaacatccgctga
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