Microbacterium sp. HA-8: AB2L57_14030
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Entry
AB2L57_14030 CDS
T10924
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mici Microbacterium sp. HA-8
Brite
KEGG Orthology (KO) [BR:
mici00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mici03032
]
AB2L57_14030 (topA)
03400 DNA repair and recombination proteins [BR:
mici03400
]
AB2L57_14030 (topA)
Enzymes [BR:
mici01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AB2L57_14030 (topA)
DNA replication proteins [BR:
mici03032
]
Prokaryotic type
DNA Topoisomerases
AB2L57_14030 (topA)
DNA repair and recombination proteins [BR:
mici03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AB2L57_14030 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
XLP02840
LinkDB
All DBs
Position
complement(2949198..2951903)
Genome browser
AA seq
901 aa
AA seq
DB search
MATSKKLVIVESPTKMKSIQSYLGDDYEVLSSVGHIRDLADKKDIPADLKKTSVGKYSID
IENGFAPFYVESERGKKTVAELKRALKQADELLLATDEDREGEAIAWHLLETLKPKVPVK
RMVFHEITKDAIRAAVEKTRDLDHDLVDAQETRRILDRLYGWDVSPVLWRKIGTGRDGAA
LSAGRVQSAATRLVVDRERERIAFVSAGYWDIEADAAKDAASFRVKLVRLDGAAIARGAD
FDEQGQLKKAVVVLDEQAARDLADAVAAVATASVTKVEAKPGTRSPYAPFTTSTMQQEAG
RKLSMSAKHAMSVAQRLYEKGYITYMRTDSQSLSTQAIQAAREQAVELYGAKAVPLQPRV
YKSKSKNAQEAHEAIRPSGEHFRTPSSVASGLDRDELRLYDLIWKRTVASQMADAKYETT
TVTLEVDAAGRRAEFTASGTVYTFKGFLEAYEEGRDEKRGDADKADEQSLPAVAVGESLA
IADVEPKGHQTTPKPRYTEASLVKALEEKGIGRPSTFASIIDTILDRGYVTKRGQALVPS
WIAFSVVRLLEENFPDLVDYDFTAALEDDLDAIARGDQKRVDWLREFYFGSEGHVGLRNI
VDNLGEIDARELNSRPVSAGVTLRIGKYGPYLEVADAENPEAEPRRVNIPEDLAPDELTP
AKAQELIDAPVAGDRVLGENPENGKLIVVKDGRFGPYVQELEPEEPQAVDEATGEVIEAP
KKRGAKKEAAPKPRTASLFKSMSVDTIDLDVALQLLSLPRTVGTDPESGEPITAQNGRYG
PYLKKGTDSRSLESEQQIFDIDLEAALAVYALPKYGARRASSALKEFEADPVSGKPIRIR
DGRFGAYVTDGETNATIPRGETVDDVDFERAVQLLADKRAKGPAPKRTAKRTTTRKAPAK
K
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
ttggccaccagcaagaagctcgtcatcgtcgagtccccgacgaagatgaagtcgatccag
tcctacctcggcgacgactacgaggtgctctcctccgtggggcacatccgcgacctcgcc
gataagaaggacatccccgccgacctgaagaagacgtcggtgggcaagtattcgatcgac
atcgaaaacggcttcgcccccttctacgtcgagtcggagcgcggcaagaagaccgtcgcc
gaactcaagcgtgcgctcaagcaggccgacgaactcctgctcgccaccgatgaagaccgc
gagggcgaagcgatcgcctggcacctgctcgagacgctcaagcccaaggtgcccgtcaag
cgcatggtgttccacgagatcacgaaggacgccatccgagccgccgtcgagaagacccgc
gatctcgaccacgacctcgtcgacgctcaggagacccgccgcatcctcgaccgcctctac
ggctgggatgtctcgcctgtgctctggcgcaagatcggcaccggccgcgacggcgccgca
ctgtcggccgggcgcgtgcagtccgccgcgacccggctcgtcgtcgaccgcgaacgcgaa
cgcatcgccttcgtctcggcggggtactgggacatcgaggccgacgcggccaaggacgcc
gcgtccttccgtgtcaagctcgtgcggctggatggcgccgcaatcgcccgcggagcggac
ttcgacgagcagggccagctgaagaaggccgtcgtcgtgctcgacgagcaagcggcccgc
gacctcgccgacgcggtcgcggcagtggcgacagcatccgtcaccaaggtcgaggcgaag
cccggcacgcgcagcccgtacgcgcccttcacgacctcgacgatgcagcaggaggccggc
cgcaaactctcgatgagcgccaagcacgccatgagcgtcgcccagcgtctctacgagaag
ggctacatcacctatatgcgcaccgactcgcagtcgctgtcgacgcaggccatccaggcc
gcgcgcgagcaggcggtcgagctgtacggtgcgaaggcggttcccctgcagccccgcgtc
tacaagagcaagagcaagaacgcccaggaggcccacgaggcgatccgtccctcgggggag
cacttccgcaccccctcgtcggtggcgagcggcctcgaccgcgacgagctgcgcctctac
gacctgatctggaaacgtacggtcgcgagccagatggccgacgcgaagtacgagacgacg
accgtgaccctcgaggtcgacgccgccggacgacgcgccgagttcaccgcatccggcacc
gtctacacgttcaagggcttcctcgaggcgtacgaggaaggccgcgacgagaagcgcggc
gatgccgacaaggccgacgagcagtcgctgcccgccgtcgcggtgggcgaatcgctcgcc
atcgccgacgtcgagccgaagggccaccagacgaccccgaagccccgctacaccgaggcc
tcgctcgtcaaggccctcgaggagaaggggatcgggcggccctcgacgttcgcgagcatc
atcgacacgatcctcgaccgcggctacgtgaccaagcgcggccaggctctcgtgccgagc
tggatcgccttcagtgtcgtccggctgctcgaggagaacttccccgacctcgtcgactac
gacttcaccgccgcgctcgaggacgacctcgacgcgatcgcccgaggcgaccagaagcgc
gtggactggctccgggagttctacttcggctccgaggggcacgtcggcctgcgaaacatc
gtcgacaacctcggcgagatcgatgcccgcgagctgaactcccggcccgtctcggccgga
gtgaccctgcgcatcggcaagtacggcccctacctcgaggtcgccgacgccgagaatccc
gaggccgaaccgcggcgcgtcaacatccccgaagacctcgcgcccgacgagctcacgccc
gccaaggcgcaggagctgatcgacgctcccgtggccggcgaccgcgtgctcggtgagaac
cccgagaacggcaagctgatcgtcgtcaaggacggccggttcggaccctacgtgcaggag
ctcgaacccgaggagccgcaggcggtcgacgaggccaccggcgaggtgatcgaagcgccc
aagaagcgcggagccaagaaggaggcggcgcccaagccgcggacggcgtcgctgttcaag
agcatgtcggtcgacaccatcgacctcgatgtcgcgctgcagctgctgtcgcttccgcgc
acggtcggcaccgaccccgagtcgggcgagccgatcacggcgcagaacgggcggtacggc
ccctatctgaagaagggcaccgactcgcgctcgctcgagagcgagcagcagatcttcgac
atcgacctcgaggccgcgctcgcggtctacgccctgcccaagtacggcgcgcgccgcgca
tcgagcgcgctcaaggagttcgaggcggacccggtcagcggcaagccgatccgcatccgc
gacggccgtttcggggcctacgtgaccgacggcgagaccaacgcgaccatcccgcgcggc
gagaccgtcgacgacgtcgacttcgaacgcgccgtccagctgctcgccgacaagcgcgcg
aagggtccggcgcccaagcgcaccgccaagcgcacgaccacgcgcaaggcgccggccaag
aagtga
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