Microbacterium sp. J1-1: LRQ07_00730
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Entry
LRQ07_00730 CDS
T11495
Name
(GenBank) isopeptide-forming domain-containing fimbrial protein
Organism
micj Microbacterium sp. J1-1
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Paralog
GFIT
Motif
Pfam:
DUF7927
CLIPPER_2
CLIPPER
SpaA_3
GBS104-like_Ig
MerT_actino
Motif
Other DBs
NCBI-ProteinID:
UUE20815
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Position
147943..153141
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AA seq
1732 aa
AA seq
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MGFRVARKDHTADGLPSERRSRWRGRAKKLIGGALSTALVASSMVFIGGTVTAAPAIAAD
PFLCTPGAVYVQSTTEVREFIVDEQGGTPGNGGTLGSTTLGVDHSNNALGISSSGRYAYT
VTNAAGSKVLAKHDRVTDTTSRTTFTLNSSVLRGAVHPVTGVYYFASGTASGAINLYAWN
ESVTPQAYVQVGTLRPTAGSSAFGANGDMAFSASGQLVLVADNVIYSSDLPTSLVPSTAT
IEAKQVHNMGDGVQGNGIAFGNLGHIFVSVSGGGNRIIEVDLPRGVTVNTTSIGTFGPTD
MASCTFPNTLTLKKDLPEGRHAATDQFALRVQSPAGYQVAQTDAATRGEATGLQPDYAGP
VFTNQGDTFRLSESASGTTDSTRYAESLDCVQVESDGSTSPVAVTADGSVVQPAGALGTD
VTCTFTNVRLAPDLALRKTSDPADGVAVQAGQRITYTVEAENTGNTLLDPVRVSDDLSGV
LAFAEYQGDVATELDGSPVASGAATITGDDLAWTGALEPGQVLTITYSVIVDADVEGERI
ANSVTASGTPPGGLPPVDPPAVATEHPVAGYTVAKSSSPAAGTVVEPGQTIEYTVTGTNT
GATVLSPASLSDDLSAVFAHAAYNSDVATEIDGAPVAAGAATITGDDLAWTGTLQPGQTV
TITYSVTVEADTSGEILKNTVSGTATPTTPDPSDPDGPQVPGEPIVPPTVTTEHPVIGSG
FTISKSADPASGTAVSAGDTVTYTITGTNTGDTDLDPARIVDDLSGVLDDAGYNDDVTAD
RGSVTVSGDTLTWTGDVPRGESVTIRYSVTIDAGVQKALLNNVASGTATPRIPVDPADPD
GPTTPGTPIVPPPAETNHPVVETGLEVTKSADPVSDTAVRAGDTITYTISGVNTGNTTLD
PASIVDDLSAVLAHAQYGGDASASTGAVELDGTTLTWTGALAPGARVDITYTVTVDADAT
GVLLRNTVTGEGTPLIPVDPTDPDSPTTPGTPVTTPPSTTEHPVASPGFTVAKSADPASG
TRVDPGSVITYTVTGTNTGDTVLDPASIADDLRGALAHASYNDDVTATRGDVSVVDDALD
WSGVLLPGQNVVITYSVTVDPTAGGETIANTATGTATPLIPTDPSDPDSPTTPGTPITPP
PATTEHPVNEPGFTFAKTVDPAAGTAVDPGDVLTYTLTAVNTGQTVLDPVEITDDLSKVL
PYASYNDDAVAVIGGLPAGAVTVDGAELDWSGALAVGQTVVITYSVTVGPEGVGSVLENS
ASATATPPGGSVITPPPGTTTNAVNVPGFSVSKSADPVSGTAVDPGSVITYTVTGVNTGE
TVLDPVAIVDDLSGVLAHADYNDDAAALIGTTASTAPVVSGDSLSWTGALQVGETVTITY
SVTVQADAGGAILENSASGSATPPGGVPPIETPPATTEHPVNEPGFELRKSADPASGTRV
DPGSVITYTVTGVNTGETALAPVSISDDLSGVLAHAVYNDDATATVIDGSASAPVVDGDE
LTWSGALAVGQRVTITYSVTVNGDAGGATIANTVAGTATPPGGGELTPPPVTTENPVGTP
GFTFVKTADPGSEKAVAAGSVVTYRLVGTNTGETGLDDVVITDDLSGVLRHADLRPGATA
VVGDRAVAAPAVDGNQLRWSGSLAQGESITITYSVIVHADAAGAKLHNVAVGTATPPGGE
TITPPTSSTDNPVLTPLALTGGILAPWVLALAIALLFGGAVLLIVRRRRSQA
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atggggtttcgtgttgcccgcaaggaccacacagccgatggccttccgtccgagcggcgc
agccgctggcggggccgcgcgaagaagctgatcggaggcgccctgagcacggcgctggtc
gcctcgtcgatggtgttcatcggaggcacggtcacggcggctcccgcgatcgcggctgac
ccgttcctctgcacgccgggcgccgtgtacgtgcagagcacgacagaggtgcgcgagttc
atcgtcgacgagcagggcggcaccccgggaaacggcggcacgctcggttccaccaccctc
ggcgtcgaccactccaacaatgccctcggcatctcctccagcggccgctacgcctacacg
gtcaccaatgcggccggatccaaggtgctggccaagcatgaccgcgtgactgacaccacg
agccgcaccacgttcacgctcaactcctccgtgctccgaggtgccgtccacccggtgacc
ggcgtctactacttcgccagcggtaccgccagcggcgccatcaacctctacgcctggaac
gagagcgtcactccgcaggcctacgtgcaggtcggcacgctccgccccaccgccggcagc
agcgcgttcggcgccaacggcgacatggccttcagcgcctcgggccagctcgtgctcgtg
gccgacaacgtcatctactcgtccgaccttcccacctcgctcgtgccgagcaccgcgacc
atcgaggccaagcaggtccacaacatgggcgacggcgtgcagggcaacggcatcgcgttc
ggaaacctcggccacatcttcgtgtcggtctccggaggcggaaaccgcatcatcgaggtc
gacctcccccgcggcgtgaccgtcaacaccacctcgatcggaaccttcgggccgaccgac
atggccagctgcaccttcccgaacaccctcacgctgaagaaggacctccccgaggggcgt
cacgccgccaccgaccagttcgccctgcgtgtgcagtcgccggccggctatcaggtcgcg
cagacggacgccgccacccgcggagaggccacggggctgcagccggactacgccggaccg
gtgttcaccaaccagggcgacaccttccgcctctccgagtccgcatccggaaccacggac
agcacccggtacgccgaatcgctcgactgcgtgcaggtcgaatccgacggctccacgtct
ccggtcgccgtgaccgcagacggcagcgtcgtccagcccgccggtgcgctcggcaccgac
gtcacgtgcacgttcacgaacgtacgtctcgcacccgacctggcgctgcgcaagacctcc
gacccggccgacggtgtcgccgtgcaggcgggtcagcgcatcacgtacaccgtcgaggcg
gagaacacgggcaacacgctcctcgaccccgtccgcgtgagcgacgacctgtccggcgtg
ctcgcgttcgccgagtaccagggagacgtcgccacggagctcgacggctcccccgtcgca
tccggcgccgcaaccatcaccggtgacgacctcgcctggaccggcgcgctcgagcccggt
caggtgctcaccatcacgtattcggtgatcgttgacgccgatgtcgaaggagagcggatc
gccaacagcgtcaccgcctccggcacccctcccggcggcttgcccccggtcgatcctccc
gcggtcgcgaccgagcaccccgtagcgggctacaccgtcgccaagagctccagccccgct
gccggcaccgtcgtggagccggggcagaccatcgagtacacggtgaccggcaccaatacc
ggtgccacggtgctgagtccggcctccctctccgatgacctgtcggccgtgttcgcacac
gccgcctacaactccgacgtcgccaccgagatcgacggcgcacccgtcgccgcgggcgca
gcgaccatcacgggcgacgacctcgcctggaccggcactctccagcccggacagaccgtg
acgatcacgtactccgtgaccgtggaggccgacacctcgggtgagatcctgaagaacacc
gtcagcggcaccgcgacgcccacgactccggacccgagtgaccccgacggaccgcaggtg
ccgggcgaacccatcgtcccgcccacggtcaccaccgagcacccggtgatcggttcggga
ttcacgatcagcaagtccgccgaccccgcctcgggcaccgccgtctcggccggcgacacc
gtgacctacacgatcaccggaaccaacacgggtgacaccgacctcgatccggcccggatc
gtcgacgacctgtcgggtgtgctcgatgacgccggctacaacgacgacgtgaccgccgac
cgcggctccgtcaccgtcagcggcgacacgctcacctggacgggcgatgtgccccgcggc
gagtccgtcaccatccgctactcggtgaccatcgatgccggagtccagaaggcgctgctg
aacaacgtcgccagtggcacggccacaccgcggatcccggtcgacccggccgaccccgac
ggtcccacgaccccggggaccccgatcgtcccgccgcccgcggagacgaaccacccggtc
gtcgagaccggcctcgaggtgacgaagtccgcggaccccgtctccgacaccgccgtgcgc
gcgggcgacacgatcacgtacacgatctccggtgtcaacacgggtaacacgacgctcgac
cccgcgtccatcgtcgacgacctgtccgccgtgctcgcccacgctcagtacggcggcgac
gcgagcgcatcgaccggagccgtcgagctcgacggcacgacgctcacctggaccggggcg
ctcgctcccggcgccagggtcgacatcacctacacggtgacggtcgacgccgacgcgacc
ggcgtgctgctgcgcaacaccgtcacgggtgaggggaccccgctcatcccggtggacccg
accgacccggacagccccaccacgcccggtaccccggtcaccacgccgccgtcgacgacg
gagcacccggtcgccagccccggcttcacggtcgcgaagtccgccgaccccgcatcgggg
acgcgtgtcgatcccggcagcgtgatcacctacaccgtcacgggcacgaacacgggtgac
accgtgctcgaccctgcctcgatcgccgatgacctgcgcggcgcgctcgctcatgcctcg
tacaacgacgacgtgacggccacccgcggcgacgtcagcgtggtggacgacgccctcgac
tggagcggcgtgctgctccccggtcagaacgtcgtcatcacctattccgtgacggtcgac
ccgaccgccgggggtgagacgatcgcgaacacggccacgggcacggcgacgccactcatc
ccgacggacccgagcgacccggacagccccaccacgccgggcacgccgatcacgccgccg
ccggcgacgacggagcacccggtcaacgagcccggcttcaccttcgccaagaccgtcgac
ccggctgcgggcacggccgtggatcccggtgatgtgctcacctacacgttgacggccgtc
aacaccggtcagacggtgctcgacccggtcgagatcacggacgacctctcgaaggtgctg
ccgtacgcctcgtacaacgacgacgctgtggccgtgatcggcggtctgcccgccggcgcg
gtgacggtcgacggcgcggagctcgactggtccggtgcgctcgccgtcggtcagactgtc
gtcatcacgtactcggtgacggtcggccccgagggcgtcggatccgtgctcgagaacagc
gcgagcgcgacggcgaccccgcccggagggtccgtcatcaccccgccgcccggcaccacg
acgaacgccgtgaacgtccccggattctcggtgtcgaagagcgccgacccggtgtcgggc
acggcggtcgaccccggcagcgtcatcacctacacggtgaccggcgtgaacaccggtgag
acggtcctcgatccggtcgcgatcgtggatgacctctccggcgtcctcgcccacgccgac
tacaacgacgacgcggccgccctgatcggcacgaccgcatcgaccgccccggtggtctcc
ggcgacagcctgtcgtggacgggagccctccaggtcggcgagaccgtcacgatcacgtac
tccgtgaccgtgcaggcggacgccgggggagcgatcctcgagaactcggcttcgggatcg
gcgaccccgcccggcggtgtgccgccgatcgagacgccgcccgccacgacggagcacccg
gtcaacgagcccggcttcgagctccgcaagtcggccgaccccgcgtcgggaacccgcgtc
gatcccggcagcgtcatcacctacacggtgaccggcgtgaacaccggagagaccgcgctg
gcgccggtgagcatcagcgacgacctctcgggcgtcctcgcccacgccgtctacaacgac
gacgccacggcgaccgtgatcgacggatccgcgtccgctccggtcgtggacggtgacgag
ctcacctggtcgggcgcgctcgccgtcggtcagcgcgtcaccatcacgtactcggtgacc
gtgaacggcgacgcaggtggtgcgacgatcgcgaacacggtcgcgggaaccgccaccccg
cccggtggtggggagctcacgccgcctccggtgacgaccgagaacccggtcggtaccccg
ggcttcacgttcgtcaagacggccgatcccggttcggagaaggccgtggccgcgggaagc
gtggtcacctaccggctcgtcggcaccaacacgggagagaccgggctggatgacgtcgtc
atcacggatgacctctccggagtgctgcggcatgccgacctccgacccggtgcgaccgcc
gtcgtgggtgaccgcgcggtggcggctcccgcggtggacgggaaccagctgcgctggagc
ggcagcctcgcccagggagagagcatcaccatcacgtactccgtgatcgtgcacgccgac
gcggcaggcgcaaagctgcacaacgtggctgtggggacggccactcctcccggcggtgag
acgatcacgccgccgacgagttcgaccgataacccggtgctgacgccgctcgcgctcacc
ggcggaatcctggccccgtgggtgctggctctggcgatcgctctgctgttcggcggtgcc
gtgctgctgatcgtgcgccgacgccgctcgcaggcctga
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