Microbacterium sp. J1-1: LRQ07_01075
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Entry
LRQ07_01075 CDS
T11495
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
micj Microbacterium sp. J1-1
Pathway
micj03030
DNA replication
micj03430
Mismatch repair
micj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
micj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LRQ07_01075
03430 Mismatch repair
LRQ07_01075
03440 Homologous recombination
LRQ07_01075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micj03032
]
LRQ07_01075
03400 DNA repair and recombination proteins [BR:
micj03400
]
LRQ07_01075
Enzymes [BR:
micj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LRQ07_01075
DNA replication proteins [BR:
micj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LRQ07_01075
DNA repair and recombination proteins [BR:
micj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LRQ07_01075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
TerB
PTCB-BRCT
DUF533
DUF4031
DUF2813
Arena_ncap_C
Motif
Other DBs
NCBI-ProteinID:
UUE20883
LinkDB
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Position
223028..224242
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AA seq
404 aa
AA seq
DB search
MTSIPVPSSGFATIDFETTGFYAEGTDRAIEISVVHSEPDGTITGQWETLINPGRDLGRQ
DIHGISAREILRAPQFPGITADLVDLLSQRVVVAHNASFDMRFLEAELGRAAYWAGVPFV
SLCTMRLARTHLGGSSTLADCCAAFDIELSGAHRAAVDARATAELLGAFVASTGQSSWRD
LLGQAERLAPYSGERGKWLARSGVEEYSPSFLERIIDRVPDLSDSDEQAEYVALVERCLL
DRYLSEHEKDALVAFAERAGLRRTTVERLHRDYLAALVRIAWADGMVTDDERADLISVAE
LLEVPVEIVLDAVAHPVEIVEPPSMSAFVLTPGDIVVLTGEMTRARSDWEQRLREHGIIV
KPAVTKAARLVIAADPDSLSGKARKARDYGIPIVGESWLAERYA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgattcccgtgccctcctccggtttcgcgaccatcgattttgagaccacgggt
ttctacgccgaggggaccgatcgggcgatcgagatttccgtggtccactctgagccggat
ggcacgatcaccggccagtgggagacgctcattaacccgggtagggacctcgggcgtcag
gacatccacggcatcagcgctcgggagatcttgcgagcgccgcagttcccgggcatcact
gccgacctggtcgatctgctctcacagcgcgtagtcgtggcgcacaacgcatccttcgac
atgagattcctcgaagctgagctcgggcgcgcggcctattgggcaggcgtgccgttcgtt
agcctctgcacgatgcgactggcgcgcacccacctcggtggaagcagcacgctcgctgat
tgctgtgctgccttcgacatcgagctcagtggggcacaccgcgcagcggttgatgcgcgc
gcgacggcggaactccttggcgctttcgtggcgagcacgggacagtcttcttggcgcgac
ctgctcggacaggccgagcgtctcgccccgtactcgggggagcgcggcaagtggctcgct
cgctcgggcgtcgaggaatactcgcccagcttcctggagagaattattgaccgcgttccg
gaccttagcgactccgatgagcaagcggagtatgtcgccctcgtcgagcggtgcctcctc
gatcgctacctgtcggagcacgagaaggatgctcttgtcgcgttcgcggagcgagccggc
ttgcgacgcacaacggtcgagcggctgcaccgtgattacctcgcggccctcgtcagaatc
gcctgggcggatggcatggtcaccgacgatgagcgcgccgatctgatctccgttgcggag
cttctcgaagtccccgtcgagatcgtgctggatgccgtggctcatcccgttgagatcgtg
gaacctccgtcgatgtctgctttcgtgctgacccctggagacattgtcgttctcacgggg
gagatgacgcgagcacgctccgattgggagcaacgtctccgcgaacacgggatcattgtg
aagcccgccgtgaccaaagcagcgcgcctcgtgatcgcggccgatcccgactctctctcc
ggcaaggcccgaaaagctcgcgactacggcatccccatcgtcggcgagtcttggctcgcc
gaacgctacgcctga
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