Microbacterium sp. J1-1: LRQ07_04105
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Entry
LRQ07_04105 CDS
T11495
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
micj Microbacterium sp. J1-1
Brite
KEGG Orthology (KO) [BR:
micj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
micj03016
]
LRQ07_04105 (truA)
Enzymes [BR:
micj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LRQ07_04105 (truA)
Transfer RNA biogenesis [BR:
micj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LRQ07_04105 (truA)
Prokaryotic type
LRQ07_04105 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UUE21462
LinkDB
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Position
862542..863390
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AA seq
282 aa
AA seq
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MRIRLDIAYDGTHFRGWAKQPTLRTVQGTLEAALARIVGSDVQFVVAGRTDAGVHASGQV
AHVDLDEKQWSRIESRQGRAPLEPAETIAGRMRGVLGAYSDVTVTRTSIAPEGFDARFSA
VWRRYRYRLADARTGFDPLRRHDTTTVRGRLDEQAMDAAARTLIGLHDFAAYCKPREEAT
TIRTLLDYRWARDAEGVLVAEVKADAFCHSMVRALVGACAAVGEGRLGVDDLVVLRDALT
RTSEFKVLAARGLILTEVGYPADDLLAARATQTRARRDGASG
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcatccggctcgacatcgcctacgacggcacccacttccgcgggtgggcgaagcag
ccgacgctccgcaccgtgcaggggactctggaagccgccctggcccggatcgtcggctcc
gacgtgcagttcgtcgtcgcgggacgcaccgacgccggagtgcacgcgagcggtcaggtg
gcccatgtcgacctcgacgagaagcagtggtcgcgcatcgagtcccgacagggccgcgcg
ccgctggagcccgccgagaccatcgccggtcgcatgcggggcgtgctcggtgcgtactcg
gatgtgacggtcacccgcacctcgatcgccccggaaggtttcgacgcgcgcttctcggcg
gtctggcgccggtaccgctaccgtctcgccgatgcccggaccgggttcgatccgctgcgc
cggcacgacacgacgaccgtccgcggtcggctcgacgaacaggccatggacgccgcagcg
cgcaccctcatcggcctgcacgacttcgcggcgtactgcaagcctcgcgaggaggcgacg
accatccgcacgctgctcgactaccgctgggcccgcgacgccgagggtgtgctcgtcgcc
gaggtcaaggccgatgcgttctgccacagcatggtgcgcgcgctcgtgggggcgtgtgcc
gccgtgggggaggggcggctcggtgtcgatgatctcgtcgtgctgcgcgatgcgctcacc
cggaccagtgagttcaaggtgctggccgcgcgcgggctgatcctcaccgaggtcggctac
cccgccgatgacctgctcgccgcgcgcgcgacccagacccgcgctcgtcgtgacggggcg
agcggctga
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