Microbacterium sp. J1-1: LRQ07_05040
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Entry
LRQ07_05040 CDS
T11495
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
micj Microbacterium sp. J1-1
Pathway
micj00260
Glycine, serine and threonine metabolism
micj00460
Cyanoamino acid metabolism
micj00630
Glyoxylate and dicarboxylate metabolism
micj00670
One carbon pool by folate
micj00680
Methane metabolism
micj01100
Metabolic pathways
micj01110
Biosynthesis of secondary metabolites
micj01120
Microbial metabolism in diverse environments
micj01200
Carbon metabolism
micj01230
Biosynthesis of amino acids
micj01240
Biosynthesis of cofactors
micj04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
micj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LRQ07_05040
09102 Energy metabolism
00680 Methane metabolism
LRQ07_05040
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LRQ07_05040
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LRQ07_05040
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LRQ07_05040
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LRQ07_05040
Enzymes [BR:
micj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LRQ07_05040
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UUE21643
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Position
1061127..1062401
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AA seq
424 aa
AA seq
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MTDRYFNAPLAEVDPEIAQVLDRELKRQQTFLEMIASENFVPVSVLQSQGSVLTNKYAEG
YPGRRYYGGCEEVDVAESLAIERAKSLFGAEFANVQPHSGASANAAVLHAIARPGDTLLG
LSLDQGGHLTHGMKINFSGRLYDIVAYGVDPETSTIDMAEVRRLAIEHRPKVIIAGWSAY
PRTMDFAAFREIADEVGALLWVDMAHFAGLVAAGLHPNPVPHAHVVSSTVHKTIGGPRSG
FILTNDADIAKKINSAVFPGQQGGPLMHVIAAKATAFKLAGTPEFKERQERVLRGAALIA
ERLSKQDLKDAGIAVRSGGTDVHLVLVDLRDAEIDGKQAEDLLHDIHITVNRNAVPNDPR
PPMVTSGLRIGTPALATRGFGDAEFTEVADIIALALLPGADVESLRTRVDALAAAFPLYP
DLQQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccgttacttcaacgccccgctcgccgaagtcgatccggagatcgctcaggtc
ctcgaccgtgagctgaagcgtcagcagaccttcctcgagatgatcgcctccgagaacttc
gttcccgtctcggtactgcagtcgcagggctcggtgctcacgaacaagtacgccgagggc
taccccgggcgtcggtactacggcggctgtgaagaggtcgacgtcgccgagtccctcgcg
atcgagcgggcgaagagcctgttcggtgccgagttcgcgaacgtgcagccgcactccggc
gcctccgccaacgccgcggtcctccatgccatcgcccggcccggcgacaccctgctcggc
ctctccctcgaccagggtggtcacctgacgcacggcatgaagatcaacttctcgggtcgt
ctgtacgacatcgtcgcgtacggtgtcgaccccgagacctcgacgatcgacatggcggag
gtgcgccgtctcgcgatcgagcaccgacccaaggtcatcatcgccggctggtcggcctac
ccgcgcacgatggacttcgcggcgttccgcgagatcgccgacgaggtcggggctctgctc
tgggtcgacatggcgcacttcgcgggtctggtggccgcgggcctgcacccgaacccggtg
ccccacgcccacgtcgtctcgtcgaccgtgcacaagacgatcggtgggccgcgctcgggc
ttcatcctcaccaacgacgccgacatcgccaagaagatcaactccgccgtgttcccgggc
cagcagggcgggccgctcatgcacgtgatcgccgccaaggcgaccgctttcaagctcgca
ggcacgcccgagttcaaggagcgccaggagcgcgtgctgcgcggtgccgcgctcatcgcc
gagcgtctgtcgaagcaggacctgaaggatgccggcatcgccgtgcgctcgggcggcacc
gatgtgcacctggtgctggtcgacctgcgtgatgccgagatcgacggcaagcaggcagaa
gacctcctgcacgacatccacatcaccgtgaaccgcaacgcggtcccgaacgacccgcgc
ccgccgatggtcacctcgggtctgcgcatcggcacgcccgcactcgcgacccgcggtttc
ggggacgccgagttcaccgaggtcgccgacatcatcgcgctcgcactgctccccggtgcg
gacgtggagtcgctgcgtacccgcgtcgacgccctggctgccgcgttcccgctctacccg
gacctgcagcagtga
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