Microbacterium sp. J1-1: LRQ07_07070
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Entry
LRQ07_07070 CDS
T11495
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
micj Microbacterium sp. J1-1
Pathway
micj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LRQ07_07070 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
micj03021
]
LRQ07_07070 (rho)
03019 Messenger RNA biogenesis [BR:
micj03019
]
LRQ07_07070 (rho)
Transcription machinery [BR:
micj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LRQ07_07070 (rho)
Messenger RNA biogenesis [BR:
micj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LRQ07_07070 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
NACHT
Spore_III_AA
PIP5K
ATPase_2
AAA_22
VWA_2
Glyco_tranf_2_3
Motif
Other DBs
NCBI-ProteinID:
UUE22030
LinkDB
All DBs
Position
1498278..1500203
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AA seq
641 aa
AA seq
DB search
MENLSETQNDSSAPAAEAAAATTETAPARKRAPRRASTATTAEMAEKAENAEKVESAEKP
AKPKTTKAKTTKAAAATTSEPASAEASAESPEAAPKAKTPRRSRAKKADAEAPAADTASP
EAPAADAAPAEAAAESAPKSTGRGRRGAQKSTPDADASAPVKDTAADAAPADAPQNGDSG
SDSDSGEEQGGRGRNRNRSRNRGRGQNSSGQDQQAQPAGDDEQSGGSNRNRQRNKRRNGA
PTDEFDTEIGEDDVLIPIAGILDVLDNYAFVRTTGYLAGPSDVYVSLGQVKKYNLRKGDA
VVGSIKQPREGEQQGRQKYNALVKVDSINGLSIDDAATRVEFGKLTPLYPQERLRLETAP
EKLTQRIIDLVAPVGKGQRGLIVAPPKAGKTIVLQQIANAIAQNNPEVHLMVVLVDERPE
EVTDMERSVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAY
NLAAPASGRVLTGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEE
FKGTGNSELRLSRALADKRIFPAVDVNASSTRREEMLLSADEVKITWKLRRALAGLDQQQ
ALEVVLGKLKETNSNVEFLVQMQKSIPTLPSGAHGHDNNIR
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacctctccgagacccagaacgattcgtcggcaccggccgcggaagctgctgca
gcgaccaccgagacggcgccggcgcgcaagcgcgcaccgcgtcgtgcgagcaccgccacg
accgcggagatggccgagaaggccgagaacgcggaaaaggtcgagagcgccgagaagccc
gcgaagccgaagacgacgaaggcgaagacgacgaaggcggctgccgccacgacgagcgag
cccgcatctgcggaggcgtccgccgagtcgcccgaggcggcgccgaaggcgaagacaccg
cgtcggagccgcgcgaagaaggcggacgccgaggctcccgccgcggataccgcttccccg
gaggctccggctgcagacgccgccccggccgaagccgctgcggaatccgcaccgaagtcc
acgggacgcggtcgccgcggtgcgcagaagtcgacgcccgacgccgacgcctccgcgccg
gtgaaggacacggcagcagacgccgctcccgccgacgcacctcagaacggcgactccggc
tccgactccgacagtggtgaggagcagggcgggcgtggtcgcaaccgcaaccgcagccgc
aaccgaggacgcgggcagaacagctccgggcaggaccagcaggctcagccggccggggat
gacgagcagtcgggcggcagcaaccgcaaccgccagcgcaacaagcgccgcaacggcgct
ccgaccgacgagttcgacacggagatcggcgaggacgatgtcctgatcccgatcgccggc
atcctcgacgtcctcgacaactacgcgttcgtccgcaccaccggctacctcgcgggtccg
agcgacgtgtacgtttcgctcggacaggtcaagaagtacaacctgcgcaagggtgacgcc
gtcgtcggctcgatcaagcagccgcgcgaaggcgagcagcagggccgtcagaagtacaac
gcgctggtcaaggtcgactccatcaacggtctgtcgatcgatgacgccgccacgcgtgtg
gagttcggcaagctcactccgctctacccgcaggagcgtctgcgtctggagacggctccc
gagaagctgacccagcgcatcatcgacctggtcgccccggtcggcaagggacagcgcggc
ctcatcgtcgctccgcccaaggccggcaagacgatcgtgctgcagcagatcgcgaacgcg
atcgcgcagaacaaccctgaggtccacctcatggtcgtgctcgtcgacgagcgccccgaa
gaggtcaccgacatggagcgctcggtcaagggcgaagtcatcgcctccacgttcgaccgc
ccggccgaagaccacaccaccgtggcggagctcgcgatcgagcgtgcgaagcgtctggtc
gagctcggccgcgacgtcgtcgtgctactcgactccataacgcgcctcggccgtgcctac
aacctggcagctccggcctcgggccgtgtgctcaccggtggtgtcgacgcctccgcgctc
tacccgcccaagcgcttcttcggagccgcgcgcaacatcgagaacggtggatccctcacg
atcctcgccaccgccctggtcgagaccgggtcgaagatggacgaggtcatcttcgaggag
ttcaagggcaccggcaacagcgagctgcgcctgtcgcgtgcgctcgcggacaagcgcatc
ttcccggcggtcgacgtgaacgcgtcgagcacccgccgcgaggagatgctgctgtcggcc
gacgaggtcaagatcacgtggaagctgcgtcgcgccctcgccggcctcgaccagcagcag
gccctcgaggtcgtcctcggcaagctcaaggagaccaactcgaacgtcgagttcctcgtg
cagatgcagaagtcgatccccacgctcccctcgggcgcgcacgggcacgacaacaacatc
cgctga
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