Microbacterium sp. J1-1: LRQ07_16235
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Entry
LRQ07_16235 CDS
T11495
Name
(GenBank) TRAP transporter large permease subunit
KO
K18218
tetracycline resistance efflux pump
Organism
micj Microbacterium sp. J1-1
Brite
KEGG Orthology (KO) [BR:
micj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
micj02000
]
LRQ07_16235
01504 Antimicrobial resistance genes [BR:
micj01504
]
LRQ07_16235
Transporters [BR:
micj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LRQ07_16235
Antimicrobial resistance genes [BR:
micj01504
]
Gene variants
Tetracycline resistance genes
Transporters
LRQ07_16235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Na_H_antiporter
DctM
Motif
Other DBs
NCBI-ProteinID:
UUE20328
LinkDB
All DBs
Position
complement(3337636..3339081)
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AA seq
481 aa
AA seq
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MPEFGALALLPIAVILVIAVATRRTLFALLCGTVAGALILGGWGGFDVWVEYTGKALSNA
TAQWLLLIVALFGILMMLFEKSGIVTDFARWVERFVTSRRKSTVLTFLLSIVLFVDDYLN
VLTTGTSMKPVTDRYRVPRTQLGAITKMTAAPIAVLVPVSTWALFFSGLFEAQGITVGGT
GFGAYLQAIPFIFFGWAALAVALLMSAGWLPKLGAIKRDALRADRDGDVFPLGTTDDERR
AEGTALLAELKTDDPDGSTAQRVATALATSTDTERKPQPWGFLIAMAVLVGVTIATDANV
VAGTAAALAVTLVIVLVQRRLSIRGVLDAALEGIESMLFVMILTVLAFMVQEMNIALQLA
EFVIQVTEPVLTPALLPAIVFAVCGIYAYATGSFWDLAAVITPVVLPLALALGADPILAG
AAVFSGAALGSTTCLYGDGIILASRSIGIKPLNLMIAILPYAGIAAGVSFVLYLVTGFVT
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattcggcgctctcgcgctcctccccatcgcggtgatcctcgtcatcgcggtc
gccacccggcgcactctcttcgctctgctctgcggcaccgtcgccggggctctgatcctc
ggcggctggggcggcttcgacgtctgggtcgagtacaccggcaaggcgctgtccaacgcc
accgcccagtggctcctgctcatcgtcgcgctgttcggcatactcatgatgctgttcgag
aagtccggcatcgtgacggacttcgcccggtgggtggagcggttcgtcacctcgcgccgc
aagtcgaccgtgctgaccttcctgctctcgatcgtgctgttcgtcgacgactacctgaac
gtgctcaccaccggcacctcgatgaagccggtcaccgatcgataccgggtgccgcgcacg
cagctcggcgcgatcacgaagatgaccgccgctccgatcgccgtgctcgtcccggtgtcg
acctgggcgctgttcttctccggactcttcgaggcgcaggggatcacggtgggcggcaca
gggttcggcgcctacctgcaggcgatcccgttcatcttcttcggctgggccgccctggcc
gtggctctcctcatgagcgccggctggctgccgaagctcggtgcgatcaagcgtgatgcg
ttgcgtgccgaccgggacggtgatgtcttcccgctcggaaccactgacgatgagcggcgg
gccgagggcaccgctctcctcgcggagctcaagaccgacgaccccgacggctccacggcg
cagcgcgtggccaccgcgctcgcgacctcgaccgacaccgaacgcaagccgcagccctgg
ggcttcctgatcgcgatggccgtgctggtcggtgtgacgatcgccaccgatgcgaatgtc
gtggccggtaccgccgcggctctcgcggtcactctggtcatcgtgctcgtgcagcgccgg
ctcagcatccgcggggtgctggacgcggcgctcgagggcatcgagagcatgctgttcgtc
atgatcctcacggtcctcgcgttcatggtgcaggagatgaacatcgccttgcagctcgcg
gagttcgtgatccaggtcaccgagcccgtgctcaccccggcgctgctgccggcgatcgtc
ttcgcggtgtgcggcatctacgcgtacgccaccggatcgttctgggacctggccgccgtg
atcaccccggtcgtgctgccgctggcgctcgcgctcggcgccgatccgatcctcgcgggt
gccgccgtgttctccggcgccgcgctcggcagcaccacctgcctctatggggacggcatc
atcctcgcgtcgaggtccatcggcatcaagccgctcaacctgatgatcgcgatcctcccg
tacgcggggatcgccgccggtgtgtcgttcgtgctctacctggtcacgggcttcgtgacg
gcctag
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