Micrococcus sp. KBS0714: B1A86_00002595
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Entry
B1A86_00002595 CDS
T06141
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mick
Micrococcus sp. KBS0714
Pathway
mick00521
Streptomycin biosynthesis
mick00523
Polyketide sugar unit biosynthesis
mick00525
Acarbose and validamycin biosynthesis
mick00541
Biosynthesis of various nucleotide sugars
mick01100
Metabolic pathways
mick01110
Biosynthesis of secondary metabolites
mick01250
Biosynthesis of nucleotide sugars
Module
mick_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mick00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
B1A86_00002595 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
B1A86_00002595 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
B1A86_00002595 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
B1A86_00002595 (rfbB)
00525 Acarbose and validamycin biosynthesis
B1A86_00002595 (rfbB)
Enzymes [BR:
mick01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
B1A86_00002595 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
adh_short
NmrA
KR
Sacchrp_dh_NADP
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
QDW18475
LinkDB
All DBs
Position
572301..573305
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AA seq
334 aa
AA seq
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MDPMHLLVTGGAGFIGSNFVHHVVRETGHDVVVLDKLTYAGNRENLAGLPEDRVTLEVGD
ICDAALVDRLVAESDAVVHYAAESHNDNSLNDPSPFIQTNIVGTFVLLEAARKHGKRFHH
VSTDEVYGDLELDDPAKFTETTPYNPSSPYSASKAGSDHLVRAWVRSFGVQATLSNCSNN
YGPYQHIEKFIPRQITNLIDGVRPRLYGQGVNVRDWIHTEDHSSAVLRILERGEIGRTYL
IGADGEKNNREVVEILLELFDRPADDYDLVADRPGHDLRYAIDNTALRTELGWEPRFTDI
RAGLADTVRWYRENEAWWRPAKAAVEATYRAQGQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
ctggaccccatgcacctcctcgtcaccggcggcgccgggttcatcggctcgaacttcgtc
caccacgtcgtccgcgagaccgggcacgacgtcgtcgtcctggacaagctgacctacgcc
ggcaaccgggagaacctcgccggcctgcccgaggaccgcgtcaccctcgaggtcggggac
atctgcgacgcggccctggtggaccgcctggtcgccgagtcggacgccgtcgtgcactac
gcggcggagtcccacaatgacaattcgctgaacgatccctccccgttcatccagacgaac
atcgtcggaaccttcgtcctcctcgaagctgcccgcaagcacggcaagcggttccaccac
gtgtccacggacgaggtctacggcgacctcgagctcgacgacccggcgaagttcaccgag
accaccccgtacaacccctccagcccctactcggcctcgaaggccggctcggaccacctg
gtgcgcgcgtgggtccgctccttcggagtgcaggccacgctgagcaactgctccaacaac
tacgggccgtaccagcacatcgagaagttcatcccgcgccagatcaccaacctgatcgac
ggcgtccgcccccgcctctacggccagggcgtcaacgtccgggactggatccacaccgag
gaccactcctcggccgtgctgcgcatcctggagcgtggcgagatcggccggacctacctg
atcggcgcggacggggagaagaacaaccgggaggtcgtggagatcctcctcgagctcttc
gaccgccccgcggacgactacgacctcgtcgccgaccgccccggccacgacctgcgctac
gcgatcgacaacaccgcgctgcgcaccgagctcggttgggagccgcggttcacggacatc
cgcgccggtctggcggacacggtccgctggtaccgcgagaacgaggcctggtggcgcccg
gccaaggccgccgtcgaggccacctaccgcgcccagggccagtga
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