KEGG   Micrococcus sp. KBS0714: B1A86_00003470
Entry
B1A86_00003470    CDS       T06141                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mick  Micrococcus sp. KBS0714
Pathway
mick03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mick00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B1A86_00003470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mick03019]
    B1A86_00003470
Messenger RNA biogenesis [BR:mick03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     B1A86_00003470
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 YicC-like_C
Other DBs
NCBI-ProteinID: QDW17007
LinkDB
Position
753912..755597
AA seq 561 aa
MTAGTRLSTPPKLKRGTCRIVQLGGLEEVGRNMVTFEIDGKILIVDCGVLFPEEHQPGVD
LILPDFDYIRDRVDDVVGIVLTHGHEDHIGAVPYLLRLRDDIPVIGSKLTLALIEAKLEE
HRIKPRTRVVKEDDIVEFGPFECEFVAVNHSIPDALAVAIHTDAGTILHTGDFKMDQLPL
DGRITDLRAFARLGEEGVDLFMTDSTNAEVPGFTTTEAEIGPTLERYFATAKRRIVVASF
SSHVHRVQQVLDAAHKHGRKVAFGGRSMIRNMTIAAKLGYLNVPNGILVDIRKVDKYRDD
EIVLMVTGSQGEPMAALSRMANGDHQVQLEEGDLVVLASSLIPGNENSVFRVINGLMKLG
ATVVHKGMAKVHVSGHASEGELLYCYNIVEPEFVMPVHGETRHLIANGRIAEKTGVPAEN
VILAGNGTVVDMTDGLVKVVGEVECGYVYVDGSSVGEISDSDLKDRRVLGEEGFLSIITV
VNRQTGAIVSGPDVHARGVAEDEKVFEEIKPKIVRALEEAVQSSKDHTAHQLQQVVRRTV
GTWVNRKLRRRPMIIPVVLEA
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgaccgcaggcacccgcctgtccaccccgcccaagctcaagcggggcacctgccgcatc
gtccagctgggcggcctcgaggaggtcggccgcaacatggtcaccttcgagatcgacggc
aagatcctcatcgtcgactgcggcgtcctcttccccgaggagcaccagcccggcgtcgac
ctgatcctgccggacttcgactacatccgggaccgcgtggacgacgtcgtcggcatcgtc
ctgacccacggccacgaggaccacatcggcgccgtgccgtacctgttgcgcctgcgcgac
gacatccccgtgatcggctccaagctgacgctcgccctgatcgaggccaagctcgaggag
caccggatcaagccgcgcacccgcgtggtcaaggaagacgacatcgtcgagttcggcccg
ttcgagtgcgagttcgtggccgtgaaccactcgatcccggacgcgctcgccgtcgccatc
cacacggacgccggcaccatcctgcacaccggcgacttcaagatggaccagctgccgctc
gacggccgcatcacggacctgcgcgccttcgcccgtctcggcgaggagggcgtggacctg
ttcatgaccgactccacgaacgccgaggtcccggggttcaccaccacggaggcggagatc
ggccccaccctcgagcgctacttcgccacggcgaagcgccgcatcgtggtggcctcgttc
tcctcccacgtgcaccgcgtgcagcaggtcctcgacgccgcccacaagcacggtcgcaag
gtggccttcggcgggcgctccatgatccgcaacatgaccatcgcggcgaagctcggctac
ctcaacgtgccgaacgggatcctcgtggacatccgcaaggtggacaagtaccgcgacgac
gagatcgtgctgatggtcaccggctcccagggcgagccgatggcggccctgtcccggatg
gccaacggcgaccaccaggtgcagctggaggagggcgacctcgtcgtgctggcctcctcg
ctgatcccgggcaacgagaactccgtgttccgcgtgatcaacgggctcatgaagctcggc
gcgaccgtggtgcacaagggcatggccaaggtgcacgtctccggccacgcctccgagggc
gagctgctgtactgctacaacatcgtcgagcccgagttcgtgatgccggtgcacggcgag
acccgccacctgatcgccaacggccggatcgcggagaagaccggcgtgccggccgagaac
gtcatcctggccggcaacggcaccgtggtggacatgaccgacggtctcgtgaaggtcgtc
ggcgaggtggagtgcggctacgtgtacgtggacggctcctccgtgggcgagatctccgac
tcggacctcaaggaccgccgtgtcctgggcgaggagggcttcctctcgatcatcaccgtg
gtcaaccggcagaccggcgcgatcgtgtccggcccggacgtccacgcccgcggcgtcgcc
gaggacgagaaggtgttcgaggagatcaagccgaagatcgtccgggcgctcgaggaggcc
gtgcagtccagcaaggaccacaccgcccaccagctccagcaggtggtccgccggaccgtc
ggcacgtgggtcaaccgcaagctgcgccgccgcccgatgatcatcccggtggtcctggag
gcctga

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