Micrococcus sp. KBS0714: B1A86_00003470
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Entry
B1A86_00003470 CDS
T06141
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mick
Micrococcus sp. KBS0714
Pathway
mick03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mick00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1A86_00003470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mick03019
]
B1A86_00003470
Messenger RNA biogenesis [BR:
mick03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B1A86_00003470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
YicC-like_C
Motif
Other DBs
NCBI-ProteinID:
QDW17007
LinkDB
All DBs
Position
753912..755597
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AA seq
561 aa
AA seq
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MTAGTRLSTPPKLKRGTCRIVQLGGLEEVGRNMVTFEIDGKILIVDCGVLFPEEHQPGVD
LILPDFDYIRDRVDDVVGIVLTHGHEDHIGAVPYLLRLRDDIPVIGSKLTLALIEAKLEE
HRIKPRTRVVKEDDIVEFGPFECEFVAVNHSIPDALAVAIHTDAGTILHTGDFKMDQLPL
DGRITDLRAFARLGEEGVDLFMTDSTNAEVPGFTTTEAEIGPTLERYFATAKRRIVVASF
SSHVHRVQQVLDAAHKHGRKVAFGGRSMIRNMTIAAKLGYLNVPNGILVDIRKVDKYRDD
EIVLMVTGSQGEPMAALSRMANGDHQVQLEEGDLVVLASSLIPGNENSVFRVINGLMKLG
ATVVHKGMAKVHVSGHASEGELLYCYNIVEPEFVMPVHGETRHLIANGRIAEKTGVPAEN
VILAGNGTVVDMTDGLVKVVGEVECGYVYVDGSSVGEISDSDLKDRRVLGEEGFLSIITV
VNRQTGAIVSGPDVHARGVAEDEKVFEEIKPKIVRALEEAVQSSKDHTAHQLQQVVRRTV
GTWVNRKLRRRPMIIPVVLEA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaggcacccgcctgtccaccccgcccaagctcaagcggggcacctgccgcatc
gtccagctgggcggcctcgaggaggtcggccgcaacatggtcaccttcgagatcgacggc
aagatcctcatcgtcgactgcggcgtcctcttccccgaggagcaccagcccggcgtcgac
ctgatcctgccggacttcgactacatccgggaccgcgtggacgacgtcgtcggcatcgtc
ctgacccacggccacgaggaccacatcggcgccgtgccgtacctgttgcgcctgcgcgac
gacatccccgtgatcggctccaagctgacgctcgccctgatcgaggccaagctcgaggag
caccggatcaagccgcgcacccgcgtggtcaaggaagacgacatcgtcgagttcggcccg
ttcgagtgcgagttcgtggccgtgaaccactcgatcccggacgcgctcgccgtcgccatc
cacacggacgccggcaccatcctgcacaccggcgacttcaagatggaccagctgccgctc
gacggccgcatcacggacctgcgcgccttcgcccgtctcggcgaggagggcgtggacctg
ttcatgaccgactccacgaacgccgaggtcccggggttcaccaccacggaggcggagatc
ggccccaccctcgagcgctacttcgccacggcgaagcgccgcatcgtggtggcctcgttc
tcctcccacgtgcaccgcgtgcagcaggtcctcgacgccgcccacaagcacggtcgcaag
gtggccttcggcgggcgctccatgatccgcaacatgaccatcgcggcgaagctcggctac
ctcaacgtgccgaacgggatcctcgtggacatccgcaaggtggacaagtaccgcgacgac
gagatcgtgctgatggtcaccggctcccagggcgagccgatggcggccctgtcccggatg
gccaacggcgaccaccaggtgcagctggaggagggcgacctcgtcgtgctggcctcctcg
ctgatcccgggcaacgagaactccgtgttccgcgtgatcaacgggctcatgaagctcggc
gcgaccgtggtgcacaagggcatggccaaggtgcacgtctccggccacgcctccgagggc
gagctgctgtactgctacaacatcgtcgagcccgagttcgtgatgccggtgcacggcgag
acccgccacctgatcgccaacggccggatcgcggagaagaccggcgtgccggccgagaac
gtcatcctggccggcaacggcaccgtggtggacatgaccgacggtctcgtgaaggtcgtc
ggcgaggtggagtgcggctacgtgtacgtggacggctcctccgtgggcgagatctccgac
tcggacctcaaggaccgccgtgtcctgggcgaggagggcttcctctcgatcatcaccgtg
gtcaaccggcagaccggcgcgatcgtgtccggcccggacgtccacgcccgcggcgtcgcc
gaggacgagaaggtgttcgaggagatcaagccgaagatcgtccgggcgctcgaggaggcc
gtgcagtccagcaaggaccacaccgcccaccagctccagcaggtggtccgccggaccgtc
ggcacgtgggtcaaccgcaagctgcgccgccgcccgatgatcatcccggtggtcctggag
gcctga
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