Micrococcus sp. KBS0714: B1A86_00003920
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Entry
B1A86_00003920 CDS
T06141
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mick
Micrococcus sp. KBS0714
Pathway
mick03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mick00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1A86_00003920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mick03021
]
B1A86_00003920
03019 Messenger RNA biogenesis [BR:
mick03019
]
B1A86_00003920
Transcription machinery [BR:
mick03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
B1A86_00003920
Messenger RNA biogenesis [BR:
mick03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B1A86_00003920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
CoV_NSP2_C
NACHT
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
QDW17088
LinkDB
All DBs
Position
857780..859849
Genome browser
AA seq
689 aa
AA seq
DB search
MTESTEQTTPTNGGGLASLKLAQLQALASQLGIAGGSRMRKADLVTAISDHQRGGSVADR
DAAERAAQAPAAPAAEAAPAAASSQDAAPAAERPARRRSRRADADTSAPAAAQDGQPQAE
AREDQTEQAPRETASDQDRSEGSETRDEGEGRPQSERRSRGRRAGDDDAQQGQDRRSDGA
QGEDGADRRGDREDRDDNGRENGRGRNGRNGRDRDNGRDRENGRENNRDRENGRDGSREQ
RGDKSEDGGRGDGGRGDRSRRDDRDDEGGRNRRNRRNRNERGRNRRGRGGPEVDETELTE
DDVLQPVAGILDVLDNYAFVRTSGYLPGPNDVYVSLAMVKKYGLRKGDAVVGAIRAPRDG
EKQQHHGGGSNRQKFNALVKISSVNGQPAVEHPQRVEFGKLVPLYPQERLRLETDPKLIG
PRVIDLVSPIGKGQRGLIVSPPKAGKTMILQSIANAIKTNNPEVHLMMVLVDERPEEVTD
MQRSVDGEVIASTFDRPADDHTTLAELAIERAKRLVEMGRDVVVLLDSMTRLGRAYNLAA
PASGRILSGGVDSSALYPPKKFFGAARNIENGGSLTILATALVETGSRMDEVIFEEFKGT
GNMELRLSRHLAERRIFPAVDVNASGTRREEALLSQEEVKIMWKLRRVLSGLEQQQALDL
LTNKIKDTASNAEFLMLVSKTTLGSKGDD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaatccacggaacagaccacgccgacgaacggcggtggcctggcctcgctcaag
ctcgcccagctccaggccctggcctctcagctcggcatcgccggcggctcgcgcatgcgc
aaggccgacctggtgaccgcgatctccgaccaccagcgcggcggctccgtggcggaccgc
gacgccgccgagcgcgcggcccaggcccccgcggcccccgccgccgaggccgccccggcc
gccgcgtcctctcaggacgcggccccggccgccgagcgcccggcccgccgccgctcgcgc
cgcgccgacgccgacacctccgctccggccgccgcccaggacgggcagccccaggccgag
gcccgcgaggaccagacggagcaggccccccgtgagaccgcctcggaccaggatcggtcc
gaggggtccgagacccgcgacgagggcgagggccgcccgcagtccgagcgccgctcccgc
ggccgccgcgccggcgacgacgacgcccagcagggtcaggaccgtcgctccgacggcgcc
cagggcgaggacggcgcggaccgccgcggcgacagggaggaccgtgacgacaacgggcgc
gagaacggccgcggccgcaacggccgcaacgggcgggaccgcgacaacggccgcgaccgt
gagaacggccgcgagaacaatcgggaccgtgagaacggccgtgacggctcgcgcgagcag
cgcggcgacaagtccgaggacggcggccggggcgacggcggacgcggggaccgcagccgc
cgcgacgaccgcgacgacgagggcggccgcaaccgtcgcaaccgccgcaaccgcaacgag
cgcggccgcaaccgccgtggccgcggcggccccgaggtcgacgagaccgagctgaccgag
gatgacgtcctgcagcccgtggccggcattctcgacgtgctggacaactacgcgttcgtc
cgcacctccggctacctgccgggcccgaacgacgtctacgtctccctggccatggtgaag
aagtacggtctgcgcaagggcgacgccgtcgtcggcgcgatccgcgccccgcgcgacggc
gagaagcagcagcaccacggcggcggctccaaccgccagaagttcaacgccctggtgaag
atctcctcggtcaacggccagcccgccgtcgagcacccgcagcgcgtggagttcggcaag
ctcgtgccgctgtacccgcaggagcgcctgcgcctggagaccgatcccaagctgatcggc
ccccgcgtgatcgacctggtcagccccatcggcaagggccagcgcggcctcatcgtctcc
ccgcccaaggccggcaagacgatgatcctgcagtcgatcgccaacgcgatcaagacgaac
aaccccgaggtccacctcatgatggtgctcgtggacgagcgccccgaggaggtcaccgac
atgcagcggtcggtggacggcgaggtcatcgcctccacgttcgaccgcccggcggacgac
cacaccaccctcgccgagctggccatcgagcgcgccaagcgcctcgtggagatgggccgc
gacgtcgtcgtgctgctcgactccatgacccgcctgggccgcgcctacaacctggccgcc
ccggcctcgggccgcatcctctccggcggtgtggactcctcggctctgtacccgccgaag
aagttcttcggcgccgcccgcaacatcgagaacggcggctcgctgaccatcctggccacc
gcgctggtcgagaccggctcgcgcatggacgaggtgatcttcgaggagttcaagggcacc
ggcaacatggagctgcgcctgtcccgccacctcgcggagcgccgcatcttcccggcggtg
gacgtcaacgcgtccggcacccgccgcgaggaggccctgctctcgcaggaggaggtcaag
atcatgtggaagctgcgccgggtgctctccggcctcgagcagcagcaggccctcgacctg
ctcaccaacaagatcaaggacaccgcgtccaacgccgagttcctcatgctggtctccaag
accacgctggggtccaagggtgacgactga
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