Micrococcus sp. KBS0714: B1A86_00008765
Help
Entry
B1A86_00008765 CDS
T06141
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mick
Micrococcus sp. KBS0714
Pathway
mick03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mick00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1A86_00008765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mick03019
]
B1A86_00008765
03009 Ribosome biogenesis [BR:
mick03009
]
B1A86_00008765
Enzymes [BR:
mick01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B1A86_00008765
Messenger RNA biogenesis [BR:
mick03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B1A86_00008765
Ribosome biogenesis [BR:
mick03009
]
Prokaryotic type
rRNA helicases
B1A86_00008765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
adh_short
HEM4
Motif
Other DBs
NCBI-ProteinID:
QDW17949
UniProt:
A0AAJ3UCM2
LinkDB
All DBs
Position
complement(1911496..1913640)
Genome browser
AA seq
714 aa
AA seq
DB search
MSDILDPQTTAEVAPELAEAEQEATGTVPQVDAAPEAPAEPAAPEAPAEPAGPTFLDLGL
DARVLAAVEDLGYTRPSPIQEATIPLLLDGRDVVGLAQTGTGKTGAFALPALSRLAETTD
VTGRADTPQVLVLAPTRELALQVADAFDSYAKHLDDVSVLAVYGGSPYGPQLAGLRRGAQ
VVVGTPGRVIDHLERGSLDLSDLQTLVLDEADEMLRMGFAEEVDRILASTPDTKQTALFS
ATMPPAIRRISAQYLNAPEEVAVARQSTTSATIRQRYLQVGHQWKFEALSRILETEEHDG
VIAFVRTRAGTEELAQKLTRAGFKAVAISGDIAQKQREKTVEDLKAGRVDILVATDVAAR
GLDVERISHVVNYDIPQDAESYVHRIGRTGRAGRQGDAVLFMTPRERFLLKQIERTTRQQ
VEEMAVPSVADVNAARKRRFADGITRTLERASEEELAVFGEIVAAYVDEHEAEPARVAAA
LGMMAQGGRPLLAREQEIPFGGARGRKDRDGGREGGRDGGRERGTSDGRGSRGPAREPAA
GNVTYWIAVGHQDRVRPGNIVGALANEVGLPASAIGAIDLRGNHSLVELPADLTSAQLEA
AANAEINGRRLGLRKDTGRPTRAERDGEDRGERRGGFRKDRGERGERGGFRGDRDGGQRG
GYRKDRDDRGSREDRGGFRKDRDDRSFRGDRRGRPGGRKPRWGAQERSDRGARR
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacatcctcgatccccagaccaccgccgaggtcgcccccgagctcgccgaggcg
gagcaggaggccaccgggaccgtcccgcaggtcgacgccgcccccgaggcacccgccgag
cccgccgcccctgaggccccggccgagcccgccggccccaccttcctggacctcggcctg
gacgcccgcgtgctggccgccgtcgaagacctgggctacacccgcccctcgccgatccag
gaggcgaccatcccgctgctgctggacggccgcgacgtcgtgggcctggcccagaccggc
accggcaagaccggcgcgttcgcgctgccggccctgtcccgcctcgccgagaccacggac
gtgaccgggcgcgcggacaccccgcaggtgctcgtcctcgccccgacccgcgagctcgcc
ctccaagtggccgacgccttcgacagctacgccaagcacctcgacgacgtctccgtgctc
gccgtctacggcggctccccgtacggcccgcagctggccggactgcgtcggggtgcgcag
gtcgtcgtcggcacgccgggccgcgtgatcgaccacctcgagcgcggctcgctggacctc
tccgacctgcagaccctcgtgctggacgaggcggacgagatgctgcgcatgggcttcgcg
gaggaggtggaccgcatcctcgcctccaccccggacacgaagcagaccgccctgttctcc
gccaccatgcccccggccatccgtcgcatctccgcccagtacctgaacgccccggaggag
gtggccgtcgcccgtcagtcgacgacgtccgccacgatccgccagcgctacctgcaggtg
ggccaccagtggaagttcgaggccctgagccggatcctcgagaccgaggagcacgacggc
gtcatcgccttcgtgcgcacccgtgccggcaccgaggagctcgcccagaagctcacgcgc
gccgggttcaaggccgtggccatctccggcgacatcgcccagaagcagcgcgagaagacc
gtggaggacctgaaggccggccgcgtggacatcctcgtggccaccgacgtcgccgcccgc
ggcctggacgtcgagcgcatctcgcacgtggtcaactacgacatcccgcaggacgccgag
tcctacgtgcaccgcatcggccgcaccggccgcgccggccgacagggcgacgccgtgctc
ttcatgaccccgcgtgagcgcttcctgctcaagcagatcgagcggaccacccgccagcag
gtcgaggagatggccgtgccctccgtcgccgacgtcaacgcggcccgcaagcgtcgcttc
gccgacggcatcacccgcaccctcgagcgcgcctcggaggaggagctggcggtgttcggc
gagatcgtcgccgcgtacgtcgacgagcacgaggccgagccggcgcgcgtggccgccgca
ctgggcatgatggcccagggcggccgcccgctgctggcccgcgagcaggagatcccgttc
ggcggcgcccgcggccgcaaggaccgcgacggcggccgcgagggtgggcgcgacggcggc
cgtgagcgcggcacgagtgacggccgcggctcgcgtggcccggcccgggagcccgcggcc
ggcaacgtgacgtactggatcgccgtcggccaccaggaccgtgtgcggccgggcaacatc
gtgggcgcgctggcgaacgaggtgggcctgcccgcctcggccatcggcgcgatcgacctg
cgtggcaaccactcgctcgtcgagctgccggcagacctgacctcggcccagctcgaggcc
gcggccaacgccgagatcaacggccgtcgcctcggcctgcgcaaggacaccggccgcccg
acccgcgccgagcgcgacggcgaggaccgcggtgagcgccgcggcggcttccgcaaggac
cgcggcgagcgcggcgagcgcggcggcttccgcggggaccgcgacggcggccagcgcggc
gggtaccgcaaggaccgggacgaccgcggctcccgcgaggatcgtggcggcttccgcaag
gaccgggacgaccgcagcttccgtggcgaccgcaggggacgccccggcggccgcaagccc
cgctggggcgcccaggagcgctcggatcggggcgcccgccgctga
DBGET
integrated database retrieval system
